RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 FOXB2Q5VYV0 432 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 TXNRD3NBQ6F5E7 133 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 VPS52Q8N1B4 723 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 ZNF398Q8TD17 642 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 MCUR1Q96AQ8 359 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 ARL8BQ9NVJ2 186 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 ARID2Q68CP9 1835 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 MAGEA13PA6NCF6 341 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 TJP3O95049 919 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 PSMG1O95456 288 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 CST3P01034 146 aaPredicted RBP17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 GLRA2P23416 452 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 LAMB3Q13751 1172 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 SEPT7Q16181 437 aaKnown RBP17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 RFWD2Q8NHY2 731 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 DEPTORQ8TB45 409 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 STMN2Q93045 179 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 TUBB6Q9BUF5 446 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 MAK16Q9BXY0 300 aaKnown RBP17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 ZCWPW1Q9H0M4 648 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 SYNCQ9H7C4 482 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 FER1L6Q2WGJ9 1857 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 A0A0G2JND7 137 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 TMEM191CA6NGB0 347 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 RNF8O76064 485 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 HAUS5O94927 633 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 EDN1P05305 212 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 TMEM191BP0C7N4 346 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 KRT4P19013 534 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 MMP8P22894 467 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 SP2Q02086 613 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 ZNF252P-AS1Q0IIN9 211 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 NCOA4Q13772 614 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 ZNF394Q53GI3 561 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 SCYL3Q8IZE3 742 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 DRAXINQ8NBI3 349 aaPredicted RBP17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 NSL1Q96IY1 281 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 RBM41Q96IZ5 413 aaKnown RBP17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 MCEEQ96PE7 176 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 GORASP1Q9BQQ3 440 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 HEY2Q9UBP5 337 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 TBXAS1P24557 533 aaPredicted RBP17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 PLCB3Q01970 1234 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 DALRD3Q5D0E6 543 aaKnown RBP17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 CNTN6Q9UQ52 1028 aa17.41■□□□□ 0.38
PCDHA1-201ENST00000378133 AP1B1Q10567 949 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 EAPPQ56P03 285 aaPredicted RBP17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 C1QTNF12Q5T7M4 302 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 SLFN12LQ6IEE8 588 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 ALLCQ8N6M5 410 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 GATA6Q92908 595 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 PTCD3Q96EY7 689 aaKnown RBP17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 KANSL3Q9P2N6 904 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 UTRNP46939 3433 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 CNTNAP2Q9UHC6 1331 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 MAP3K7O43318 606 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 IFNB1P01574 187 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 SUPT20HL2P0C7V6 817 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 ADRA1DP25100 572 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 OGDHQ02218 1023 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 CUL3Q13618 768 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 SUPT20HL1Q3ZLR7 823 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 DCUN1D2Q6PH85 259 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 SPOCD1Q6ZMY3 1216 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 CCNJLQ8IV13 435 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 ZBED8Q8IZ13 594 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 GBP5Q96PP8 586 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 CGRRF1Q99675 332 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 TMEM121Q9BTD3 319 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 PORCNQ9H237 461 aa17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 STX18Q9P2W9 335 aaKnown RBP17.4■□□□□ 0.38
PCDHA1-201ENST00000378133 NFASCO94856 1347 aa17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 A0A0B4J269 797 aa17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 GOLGA8SH3BPF8 625 aa17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 GOLGA8MH3BSY2 632 aa17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 LDHAP00338 332 aaKnown RBP17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 WDR72Q3MJ13 1102 aa17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 WDR60Q8WVS4 1066 aa17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 PSMC3IPQ9P2W1 217 aaPredicted RBP17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 G3BP2Q9UN86 482 aaKnown RBP17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 A0A1B0GVG6 124 aa17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 BANF1O75531 89 aa17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 FAM163BP0C2L3 166 aa17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 ABCD1P33897 745 aa17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 PSMC4P43686 418 aa17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 BACE1P56817 501 aa17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 ZBTB16Q05516 673 aa17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 REPS2Q8NFH8 660 aa17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 TRIM55Q9BYV6 548 aa17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 PCMTD2Q9NV79 361 aa17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 ZNF214Q9UL59 606 aaPredicted RBP17.39■□□□□ 0.37
PCDHA1-201ENST00000378133 SPATA31C2B4DYI2 1134 aa17.38■□□□□ 0.37
PCDHA1-201ENST00000378133 NAMPTP43490 491 aa17.38■□□□□ 0.37
PCDHA1-201ENST00000378133 DNAJC24Q6P3W2 148 aa17.38■□□□□ 0.37
PCDHA1-201ENST00000378133 DRICH1Q6PGQ1 229 aaPredicted RBP17.38■□□□□ 0.37
PCDHA1-201ENST00000378133 RINLQ6ZS11 566 aa17.38■□□□□ 0.37
PCDHA1-201ENST00000378133 CDHR1Q96JP9 859 aa17.38■□□□□ 0.37
PCDHA1-201ENST00000378133 EPAS1Q99814 870 aa17.38■□□□□ 0.37
PCDHA1-201ENST00000378133 ZNF302Q9NR11 478 aa17.38■□□□□ 0.37
PCDHA1-201ENST00000378133 PDP2Q9P2J9 529 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms