RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 PPP3CAQ08209 521 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 C1orf220Q5T0J3 134 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 ANKRD40Q6AI12 368 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 PHLDB3Q6NSJ2 640 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 VSTM1Q6UX27 236 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 DTWD2Q8NBA8 298 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 PJA1Q8NG27 643 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 TTC8Q8TAM2 541 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 TAS1R2Q8TE23 839 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 TAF4BQ92750 862 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 DNASE1L2Q92874 299 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 RSPRY1Q96DX4 576 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 TNIP3Q96KP6 325 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 MKNK1Q9BUB5 465 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 SLC46A2Q9BY10 475 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 GTPBP4Q9BZE4 634 aaKnown RBP12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 ZNF518BQ9C0D4 1074 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 SDCBP2Q9H190 292 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 TRPV4Q9HBA0 871 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 WDFY4Q6ZS81 3184 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 FAM170BA6NMN3 283 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 F8VP50 259 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 STX10O60499 249 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 LRRN2O75325 713 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 ABL1P00519 1130 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 F11P03951 625 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 FAM163BP0C2L3 166 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 CD58P19256 250 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 TRIM21P19474 475 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 MXI1P50539 228 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 KPNA1P52294 538 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 PMS1P54277 932 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 FKBP3Q00688 224 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 KRT39Q6A163 491 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 ZNF852Q6ZMS4 543 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 DENND5BQ6ZUT9 1274 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 TMEM150AQ86TG1 271 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 ACOT1Q86TX2 421 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 CCDC105Q8IYK2 499 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 CMTM8Q8IZV2 173 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 ADSSL1Q8N142 457 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 BPIFB1Q8TDL5 484 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 ZFYVE19Q96K21 471 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 B3GNT5Q9BYG0 378 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 ELOVL4Q9GZR5 314 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 IRF2BPLQ9H1B7 796 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 TMEM8AQ9HCN3 771 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 NDRG2Q9UN36 371 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 CTNND2Q9UQB3 1225 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 MTF2Q9Y483 593 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 PIAS3Q9Y6X2 628 aa12.32□□□□□ -0.44
SMARCE1-203ENST00000377808 TRAV19A0A0A6YYK7 116 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 CHADO15335 359 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 SLC16A3O15427 465 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 TADA3O75528 432 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 ASS1P00966 412 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 CKMP06732 381 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 ASPAP45381 313 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 NDST1P52848 882 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 CACNA2D1P54289 1103 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 UBE2HP62256 183 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 LRRC63Q05C16 580 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 CCDC40Q4G0X9 1142 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 COBLL1Q53SF7 1204 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 FAM35AQ86V20 835 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 ALYREFQ86V81 257 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 CELF5Q8N6W0 485 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 SPATA20Q8TB22 786 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 TRMT2BQ96GJ1 504 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 SPATA17Q96L03 361 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 BCO2Q9BYV7 579 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 NIF3L1Q9GZT8 377 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 APOBEC3GQ9HC16 384 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 LTB4R2Q9NPC1 389 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 KRT82Q9NSB4 513 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 FAM49BQ9NUQ9 324 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 THG1LQ9NWX6 298 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 EHD2Q9NZN4 543 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 HMGXB4Q9UGU5 601 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 ZMYM5Q9UJ78 669 aa12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 MRPS17Q9Y2R5 130 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-203ENST00000377808 NUP210Q8TEM1 1887 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 MAN2B1O00754 1011 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 AP1G2O75843 785 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 CCDC130P13994 396 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 CCNE1P24864 410 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 TARSP26639 723 aaKnown RBP12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 ADORA2BP29275 332 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 GTF2H1P32780 548 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 PPP1R2P41236 205 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 SOX9P48436 509 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 STX17P56962 302 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 USP46P62068 366 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 ENPEPQ07075 957 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 FCHO2Q0JRZ9 810 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 ANGPT1Q15389 498 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 CAMK4Q16566 473 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 ARHGAP29Q52LW3 1261 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 WDR44Q5JSH3 913 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 CC2D1AQ6P1N0 951 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms