RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 FBXO25Q8TCJ0 367 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 TBC1D10AQ9BXI6 508 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 SEMA4AQ9H3S1 761 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 TMEM206Q9H813 350 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 APEX2Q9UBZ4 518 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 PPP1R9AQ9ULJ8 1098 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 SLC30A1Q9Y6M5 507 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 SH3PXD2BA1X283 911 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 CAPN9O14815 690 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 YWHABP31946 246 aaKnown RBP16.23■□□□□ 0.19
FXN-201ENST00000377270 GPC3P51654 580 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 DLG4P78352 724 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 GHRHRQ02643 423 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 PPP2R5EQ16537 467 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 SYCP2LQ5T4T6 812 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 MFSD5Q6N075 450 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 VPS50Q96JG6 964 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 ACCSQ96QU6 501 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 RMDN3Q96TC7 470 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 SNX25Q9H3E2 840 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 KRT82Q9NSB4 513 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 ASTN2O75129 1339 aaPredicted RBP16.23■□□□□ 0.19
FXN-201ENST00000377270 FUOMA2VDF0 154 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 FAM187AA6NFU0 413 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 ZBED4O75132 1171 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 KRT36O76013 467 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 PLS3P13797 630 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 GALCP54803 685 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 DRG2P55039 364 aaKnown RBP16.22■□□□□ 0.19
FXN-201ENST00000377270 MKRN3Q13064 507 aaKnown RBP16.22■□□□□ 0.19
FXN-201ENST00000377270 SUZ12Q15022 739 aaKnown RBP16.22■□□□□ 0.19
FXN-201ENST00000377270 UGCGQ16739 394 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 ZDHHC24Q6UX98 284 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 NSMFQ6X4W1 530 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 SAMD7Q7Z3H4 446 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 IFNLR1Q8IU57 520 aaPredicted RBP16.22■□□□□ 0.19
FXN-201ENST00000377270 SYCE1Q8N0S2 351 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 DDHD1Q8NEL9 900 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 SLC30A5Q8TAD4 765 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 CKAP2Q8WWK9 683 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 GPR88Q9GZN0 384 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 MAP3K20Q9NYL2 800 aaKnown RBP16.22■□□□□ 0.19
FXN-201ENST00000377270 NDUFA13Q9P0J0 144 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 HAO1Q9UJM8 370 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 BCS1LQ9Y276 419 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 DIS3Q9Y2L1 958 aaKnown RBP16.22■□□□□ 0.19
FXN-201ENST00000377270 NR2E1Q9Y466 385 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 TMEM120BA0PK00 339 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 FAM170AA1A519 330 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 RNASEH1O60930 286 aaKnown RBP16.22■□□□□ 0.19
FXN-201ENST00000377270 FOSL1P15407 271 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 TARSP26639 723 aaKnown RBP16.22■□□□□ 0.19
FXN-201ENST00000377270 RCVRNP35243 200 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 ACVR2BQ13705 512 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 TGFBIQ15582 683 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 DALRD3Q5D0E6 543 aaKnown RBP16.22■□□□□ 0.19
FXN-201ENST00000377270 RBM44Q6ZP01 1051 aaKnown RBP16.22■□□□□ 0.19
FXN-201ENST00000377270 RNF207Q6ZRF8 634 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 FASTKD5Q7L8L6 764 aaKnown RBP16.22■□□□□ 0.19
FXN-201ENST00000377270 NT5DC3Q86UY8 548 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 ECHDC2Q86YB7 292 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 PPP1R14CQ8TAE6 165 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 PLEKHO2Q8TD55 490 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 HES6Q96HZ4 224 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 CBWD1Q9BRT8 395 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 B3GNT4Q9C0J1 378 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 TCEAL9Q9UHQ7 104 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 SNX24Q9Y343 169 aa16.22■□□□□ 0.19
FXN-201ENST00000377270 CCDC160A6NGH7 325 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 DKC1O60832 514 aaKnown RBP eCLIP16.21■□□□□ 0.19
FXN-201ENST00000377270 B3GALNT1O75752 331 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 MAPTP10636 758 aaKnown RBP16.21■□□□□ 0.19
FXN-201ENST00000377270 CHRNB1P11230 501 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 CPA3P15088 417 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 COPB2P35606 906 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 ZNF280AP59817 542 aaPredicted RBP16.21■□□□□ 0.19
FXN-201ENST00000377270 TUBA4AP68366 448 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 ALCAMQ13740 583 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 TBC1D10BQ4KMP7 808 aaPredicted RBP16.21■□□□□ 0.19
FXN-201ENST00000377270 UBAP2Q5T6F2 1119 aaKnown RBP16.21■□□□□ 0.19
FXN-201ENST00000377270 ARHGEF16Q5VV41 709 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 NLRP9Q7RTR0 991 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 HAUS6Q7Z4H7 955 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 CFAP61Q8NHU2 1237 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 CCDC110Q8TBZ0 833 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 SLC16A10Q8TF71 515 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 NEURL2Q9BR09 285 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 EPB41L1Q9H4G0 881 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 GPRC5CQ9NQ84 441 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 NUMBLQ9Y6R0 609 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 EMSYQ7Z589 1322 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 KIAA0391O15091 583 aaKnown RBP16.21■□□□□ 0.19
FXN-201ENST00000377270 XPOTO43592 962 aaKnown RBP16.21■□□□□ 0.19
FXN-201ENST00000377270 BAG6P46379 1132 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 VAMP7P51809 220 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 PEX3P56589 373 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 LPIN1Q14693 890 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 ZNF423Q2M1K9 1284 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 IL23RQ5VWK5 629 aa16.21■□□□□ 0.19
FXN-201ENST00000377270 CGB2Q6NT52 195 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms