RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 WDR78Q5VTH9 848 aa18.02■□□□□ 0.47
TRIM27-201ENST00000377194 GPAT2Q6NUI2 795 aa18.02■□□□□ 0.47
TRIM27-201ENST00000377194 PLPPR4Q7Z2D5 763 aa18.02■□□□□ 0.47
TRIM27-201ENST00000377194 ZBTB8OSQ8IWT0 167 aa18.02■□□□□ 0.47
TRIM27-201ENST00000377194 CYP4X1Q8N118 509 aa18.02■□□□□ 0.47
TRIM27-201ENST00000377194 NIF3L1Q9GZT8 377 aa18.02■□□□□ 0.47
TRIM27-201ENST00000377194 INO80B-WBP1J3KQ70 363 aa18.01■□□□□ 0.47
TRIM27-201ENST00000377194 ITGBL1O95965 494 aaPredicted RBP18.01■□□□□ 0.47
TRIM27-201ENST00000377194 GRM1Q13255 1194 aa18.01■□□□□ 0.47
TRIM27-201ENST00000377194 RNF43Q68DV7 783 aa18.01■□□□□ 0.47
TRIM27-201ENST00000377194 MTHFD1LQ6UB35 978 aa18.01■□□□□ 0.47
TRIM27-201ENST00000377194 MAIP1Q8WWC4 291 aa18.01■□□□□ 0.47
TRIM27-201ENST00000377194 SNF8Q96H20 258 aa18.01■□□□□ 0.47
TRIM27-201ENST00000377194 MCEEQ96PE7 176 aa18.01■□□□□ 0.47
TRIM27-201ENST00000377194 INO80BQ9C086 356 aaPredicted RBP18.01■□□□□ 0.47
TRIM27-201ENST00000377194 RNPEPQ9H4A4 650 aa18.01■□□□□ 0.47
TRIM27-201ENST00000377194 AGTPBP1Q9UPW5 1226 aa18.01■□□□□ 0.47
TRIM27-201ENST00000377194 ADCY8P40145 1251 aa18.01■□□□□ 0.47
TRIM27-201ENST00000377194 ASPAP45381 313 aa18.01■□□□□ 0.47
TRIM27-201ENST00000377194 CCNG2Q16589 344 aa18.01■□□□□ 0.47
TRIM27-201ENST00000377194 TSHZ1Q6ZSZ6 1077 aa18.01■□□□□ 0.47
TRIM27-201ENST00000377194 EXD1Q8NHP7 514 aa18.01■□□□□ 0.47
TRIM27-201ENST00000377194 ACSF2Q96CM8 615 aaPredicted RBP18.01■□□□□ 0.47
TRIM27-201ENST00000377194 FZD8Q9H461 694 aa18.01■□□□□ 0.47
TRIM27-201ENST00000377194 PCMTD2Q9NV79 361 aa18.01■□□□□ 0.47
TRIM27-201ENST00000377194 IVNS1ABPQ9Y6Y0 642 aa18.01■□□□□ 0.47
TRIM27-201ENST00000377194 SMAPO00193 183 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 ACKR2O00590 384 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 SLC25A27O95847 323 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 GAS8O95995 478 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 USP4Q13107 963 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 TRPC3Q13507 836 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 KYNUQ16719 465 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 ATF7IP2Q5U623 682 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 FOXB2Q5VYV0 432 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 KAZNQ674X7 775 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 GORASP1Q9BQQ3 440 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 TXLNGQ9NUQ3 528 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 IP6K2Q9UHH9 426 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 POLIQ9UNA4 740 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 MGAMO43451 1857 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 DICER1Q9UPY3 1922 aaKnown RBP18■□□□□ 0.47
TRIM27-201ENST00000377194 EVPLQ92817 2033 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 CXCL11O14625 94 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 TXNP10599 105 aaKnown RBP18■□□□□ 0.47
TRIM27-201ENST00000377194 ATP5DP30049 168 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 SKIV2L2P42285 1042 aaKnown RBP18■□□□□ 0.47
TRIM27-201ENST00000377194 NFX1Q12986 1120 aaKnown RBP18■□□□□ 0.47
TRIM27-201ENST00000377194 KCTD2Q14681 263 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 MTFR1Q15390 333 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 GJC2Q5T442 439 aaPredicted RBP18■□□□□ 0.47
TRIM27-201ENST00000377194 CYP4A22Q5TCH4 519 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 EFCAB12Q6NXP0 572 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 MPZL3Q6UWV2 235 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 GLIS1Q8NBF1 620 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 SPOCK2Q92563 424 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 NXF1Q9UBU9 619 aaKnown RBP18■□□□□ 0.47
TRIM27-201ENST00000377194 TJP2Q9UDY2 1190 aa18■□□□□ 0.47
TRIM27-201ENST00000377194 CBX6O95503 412 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 FOXN2P32314 431 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 TSNAXIP1Q2TAA8 658 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 ZNF699Q32M78 642 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 MFSD7Q6UXD7 560 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 CCDC125Q86Z20 511 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 ANKRD13AQ8IZ07 590 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 GRK7Q8WTQ7 553 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 MAGEB18Q96M61 343 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 MMP19Q99542 508 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 SBF1O95248 1867 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 CXCL8P10145 99 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 CETPP11597 493 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 ATF2P15336 505 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 MAN1A1P33908 653 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 RAP1GAPP47736 663 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 SYDE1Q6ZW31 735 aaPredicted RBP17.99■□□□□ 0.47
TRIM27-201ENST00000377194 SRRM1Q8IYB3 904 aaKnown RBP17.99■□□□□ 0.47
TRIM27-201ENST00000377194 TBC1D10AQ9BXI6 508 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 PITPNM3Q9BZ71 974 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 PPME1Q9Y570 386 aa17.99■□□□□ 0.47
TRIM27-201ENST00000377194 GAS2O43903 313 aaKnown RBP17.98■□□□□ 0.47
TRIM27-201ENST00000377194 TAC1P20366 129 aa17.98■□□□□ 0.47
TRIM27-201ENST00000377194 CDH8P55286 799 aa17.98■□□□□ 0.47
TRIM27-201ENST00000377194 MBTD1Q05BQ5 628 aa17.98■□□□□ 0.47
TRIM27-201ENST00000377194 MKRN3Q13064 507 aaKnown RBP17.98■□□□□ 0.47
TRIM27-201ENST00000377194 ORC1Q13415 861 aa17.98■□□□□ 0.47
TRIM27-201ENST00000377194 TTLL12Q14166 644 aaPredicted RBP17.98■□□□□ 0.47
TRIM27-201ENST00000377194 LBRQ14739 615 aaKnown RBP17.98■□□□□ 0.47
TRIM27-201ENST00000377194 ZFYVE27Q5T4F4 411 aa17.98■□□□□ 0.47
TRIM27-201ENST00000377194 TMEM35BQ8NCS4 154 aa17.98■□□□□ 0.47
TRIM27-201ENST00000377194 ANKRD27Q96NW4 1050 aa17.98■□□□□ 0.47
TRIM27-201ENST00000377194 SLITRK1Q96PX8 696 aa17.98■□□□□ 0.47
TRIM27-201ENST00000377194 PPP1R16BQ96T49 567 aa17.98■□□□□ 0.47
TRIM27-201ENST00000377194 TRAIPQ9BWF2 469 aa17.98■□□□□ 0.47
TRIM27-201ENST00000377194 LRMDAQ9H2I8 198 aa17.98■□□□□ 0.47
TRIM27-201ENST00000377194 DENND2DQ9H6A0 471 aaPredicted RBP17.98■□□□□ 0.47
TRIM27-201ENST00000377194 METTL5Q9NRN9 209 aaKnown RBP17.98■□□□□ 0.47
TRIM27-201ENST00000377194 NMRK1Q9NWW6 199 aa17.98■□□□□ 0.47
TRIM27-201ENST00000377194 ANAPC5Q9UJX4 755 aa17.98■□□□□ 0.47
TRIM27-201ENST00000377194 KCNH4Q9UQ05 1017 aa17.98■□□□□ 0.47
TRIM27-201ENST00000377194 CHKBQ9Y259 395 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms