RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 TRMT10CQ7L0Y3 403 aaKnown RBP14.7□□□□□ -0.06
MSH5-202ENST00000375740 TRPM8Q7Z2W7 1104 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 ZNF467Q7Z7K2 595 aaPredicted RBP14.7□□□□□ -0.06
MSH5-202ENST00000375740 EPS8L3Q8TE67 593 aaKnown RBP14.7□□□□□ -0.06
MSH5-202ENST00000375740 ATXN2LQ8WWM7 1075 aaKnown RBP14.7□□□□□ -0.06
MSH5-202ENST00000375740 SH3GL3Q99963 347 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 TMEM109Q9BVC6 243 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 MORF4L1Q9UBU8 362 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 STRIP2Q9ULQ0 834 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 SLC45A1Q9Y2W3 748 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 ZSWIM8A7E2V4 1837 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 ANKRD33BA6NCL7 494 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 RGS16O15492 202 aaPredicted RBP14.7□□□□□ -0.06
MSH5-202ENST00000375740 ITGBL1O95965 494 aaPredicted RBP14.7□□□□□ -0.06
MSH5-202ENST00000375740 KRT3P12035 628 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 SLCO1A2P46721 670 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 IFI35P80217 286 aaPredicted RBP14.7□□□□□ -0.06
MSH5-202ENST00000375740 AP1ARQ63HQ0 302 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 GSTA5Q7RTV2 222 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 JOSD2Q8TAC2 188 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 TMEM176AQ96HP8 235 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 PWWP2AQ96N64 755 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 PRMT1Q99873 361 aaKnown RBP14.7□□□□□ -0.06
MSH5-202ENST00000375740 TRAIPQ9BWF2 469 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 DNAJC17Q9NVM6 304 aaKnown RBP14.7□□□□□ -0.06
MSH5-202ENST00000375740 NOP53Q9NZM5 478 aaKnown RBP14.7□□□□□ -0.06
MSH5-202ENST00000375740 IQCA1LA6NCM1 817 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 SIGLEC16A6NMB1 481 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 TSPAN1O60635 241 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 TJP3O95049 919 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 ATICP31939 592 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 GCLCP48506 637 aaPredicted RBP14.69□□□□□ -0.06
MSH5-202ENST00000375740 IFNAR2P48551 515 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 PSMC1P62191 440 aaKnown RBP14.69□□□□□ -0.06
MSH5-202ENST00000375740 PTPN11Q06124 597 aaPredicted RBP14.69□□□□□ -0.06
MSH5-202ENST00000375740 GRIK4Q16099 956 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 SMYD5Q6GMV2 418 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 GPR142Q7Z601 462 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 NIPA2Q8N8Q9 360 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 HPDLQ96IR7 371 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 CPXM1Q96SM3 734 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 DNPEPQ9ULA0 475 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 LIASO43766 372 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 CILPO75339 1184 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 ACSL3O95573 720 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 NQO1P15559 274 aaKnown RBP14.69□□□□□ -0.06
MSH5-202ENST00000375740 PSMA2P25787 234 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 NCALDP61601 193 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 CAV1Q03135 178 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 TMEM132DQ14C87 1099 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 KIAA0319LQ8IZA0 1049 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 ANKS4BQ8N8V4 417 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 CCDC89Q8N998 374 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 KCNV2Q8TDN2 545 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 MAML3Q96JK9 1138 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 TRIM33Q9UPN9 1127 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 IGF2BP3O00425 579 aaKnown RBP eCLIP14.69□□□□□ -0.06
MSH5-202ENST00000375740 RASGRF2O14827 1237 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 KRT16P08779 473 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 DUSP28Q4G0W2 176 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 ANKRD23Q86SG2 305 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 CROCCP2Q86T23 111 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 ACAP3Q96P50 834 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 VRTNQ9H8Y1 702 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 DDX56Q9NY93 547 aaKnown RBP14.69□□□□□ -0.06
MSH5-202ENST00000375740 STK38LQ9Y2H1 464 aa14.69□□□□□ -0.06
MSH5-202ENST00000375740 LRRD1A4D1F6 860 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 UNCXA6NJT0 531 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 HGSO14964 777 aaPredicted RBP14.68□□□□□ -0.06
MSH5-202ENST00000375740 MAP3K13O43283 966 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 MICAL2O94851 1124 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 ERBB2P04626 1255 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 MMP3P08254 477 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 VIMP08670 466 aaKnown RBP14.68□□□□□ -0.06
MSH5-202ENST00000375740 ALADP13716 330 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 KLRC2P26717 231 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 COPS2P61201 443 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 KYAT1Q16773 422 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 IZUMO3Q5VZ72 239 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 ARFGAP1Q8N6T3 406 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 OR6J1Q8NGC5 347 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 HEXIM2Q96MH2 286 aaKnown RBP14.68□□□□□ -0.06
MSH5-202ENST00000375740 SYNCQ9H7C4 482 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 CYP3A43Q9HB55 503 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 DPP3Q9NY33 737 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 ZNF148Q9UQR1 794 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 SCN4AP35499 1836 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 hCG_1818297A0A087WSY0 165 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 GSTA1P08263 222 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 CDKN2BP42772 138 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 LMNB2Q03252 620 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 ACVR2BQ13705 512 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 AUHQ13825 339 aaKnown RBP14.68□□□□□ -0.06
MSH5-202ENST00000375740 KYNUQ16719 465 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 TFDP3Q5H9I0 405 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 DPH6Q7L8W6 267 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 XYLT1Q86Y38 959 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 EMC1Q8N766 993 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 GLIS1Q8NBF1 620 aa14.68□□□□□ -0.06
MSH5-202ENST00000375740 BBOF1Q8ND07 529 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms