RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 FAM35AQ86V20 835 aa22.3■■□□□ 1.16
MAP1LC3A-202ENST00000374837 ARHGEF19Q8IW93 802 aa22.3■■□□□ 1.16
MAP1LC3A-202ENST00000374837 UBR7Q8N806 425 aa22.3■■□□□ 1.16
MAP1LC3A-202ENST00000374837 ST13P5Q8NFI4 369 aaPredicted RBP22.3■■□□□ 1.16
MAP1LC3A-202ENST00000374837 SLC2A14Q8TDB8 520 aa22.3■■□□□ 1.16
MAP1LC3A-202ENST00000374837 RSAD2Q8WXG1 361 aa22.3■■□□□ 1.16
MAP1LC3A-202ENST00000374837 SPATA17Q96L03 361 aa22.3■■□□□ 1.16
MAP1LC3A-202ENST00000374837 C8orf48Q96LL4 319 aa22.3■■□□□ 1.16
MAP1LC3A-202ENST00000374837 TUBGCP2Q9BSJ2 902 aa22.3■■□□□ 1.16
MAP1LC3A-202ENST00000374837 CRACR2AQ9BSW2 395 aa22.3■■□□□ 1.16
MAP1LC3A-202ENST00000374837 KCNK12Q9HB15 430 aa22.3■■□□□ 1.16
MAP1LC3A-202ENST00000374837 FAM49BQ9NUQ9 324 aa22.3■■□□□ 1.16
MAP1LC3A-202ENST00000374837 MAGED2Q9UNF1 606 aaPredicted RBP22.3■■□□□ 1.16
MAP1LC3A-202ENST00000374837 DENND4AQ7Z401 1863 aa22.3■■□□□ 1.16
MAP1LC3A-202ENST00000374837 ANHXE9PGG2 379 aa22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 TRIM66O15016 1216 aa22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 DCXO43602 365 aa22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 NOL4O94818 638 aa22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 FGF19O95750 216 aa22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 PRKCSHP14314 528 aaPredicted RBP22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 RAD23BP54727 409 aa22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 VWA3BQ502W6 1294 aa22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 TCP11X2Q5H9J9 407 aa22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 RRAGAQ7L523 313 aa22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 PPM1KQ8N3J5 372 aa22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 SLC4A11Q8NBS3 891 aa22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 KAT5Q92993 513 aa22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 TMEM176AQ96HP8 235 aa22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 HEXIM2Q96MH2 286 aaKnown RBP22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 ZSWIM3Q96MP5 696 aa22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 HNRNPABQ99729 332 aaKnown RBP22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 ATXN3LQ9H3M9 355 aa22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 FANCLQ9NW38 375 aa22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 IGSF9Q9P2J2 1179 aa22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 ATP8B3O60423 1300 aa22.29■■□□□ 1.16
MAP1LC3A-202ENST00000374837 DOCK6Q96HP0 2047 aa22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 NOTCH4Q99466 2003 aa22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 LETM1O95202 739 aaPredicted RBP22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 F11P03951 625 aa22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 TRIM21P19474 475 aaKnown RBP22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 EEF1GP26641 437 aaKnown RBP22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 ANXA13P27216 316 aa22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 YWHAEP62258 255 aaKnown RBP22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 HTR4Q13639 388 aa22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 PTPN21Q16825 1174 aa22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 ANO6Q4KMQ2 910 aa22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 MIIPQ5JXC2 388 aa22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 CDKAL1Q5VV42 579 aa22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 PHLDB3Q6NSJ2 640 aa22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 PARM1Q6UWI2 310 aa22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 GBP6Q6ZN66 633 aa22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 CYFIP2Q96F07 1278 aa22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 MYRFLQ96LU7 910 aa22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 CEP295NLQ96MC4 621 aa22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 DNAI2Q9GZS0 605 aa22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 NDST4Q9H3R1 872 aa22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 GCNT4Q9P109 453 aa22.28■■□□□ 1.16
MAP1LC3A-202ENST00000374837 AP1G2O75843 785 aa22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 ALADP13716 330 aa22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 SLC9A1P19634 815 aa22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 ACO1P21399 889 aaKnown RBP22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 ADORA2BP29275 332 aa22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 CDC25CP30307 473 aa22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 MYL5Q02045 173 aa22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 NCAPHQ15003 741 aa22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 SKOR2Q2VWA4 1001 aaPredicted RBP22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 DENND5BQ6ZUT9 1274 aa22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 TMEM150AQ86TG1 271 aa22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 FGF14Q92915 247 aa22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 NXPE3Q969Y0 559 aa22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 TRMT2BQ96GJ1 504 aaKnown RBP22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 SMARCD1Q96GM5 515 aa22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 KCNK16Q96T55 309 aa22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 SMOQ99835 787 aa22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 FUCA2Q9BTY2 467 aa22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 RPP25Q9BUL9 199 aaKnown RBP22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 KRT82Q9NSB4 513 aa22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 SORCS3Q9UPU3 1222 aa22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 C5orf42Q9H799 3197 aa22.27■■□□□ 1.16
MAP1LC3A-202ENST00000374837 GTPBP10A4D1E9 387 aaKnown RBP22.26■■□□□ 1.15
MAP1LC3A-202ENST00000374837 PRR33A8MZF0 331 aa22.26■■□□□ 1.15
MAP1LC3A-202ENST00000374837 USP46P62068 366 aa22.26■■□□□ 1.15
MAP1LC3A-202ENST00000374837 CYP4F8P98187 520 aa22.26■■□□□ 1.15
MAP1LC3A-202ENST00000374837 GCNT1Q02742 428 aa22.26■■□□□ 1.15
MAP1LC3A-202ENST00000374837 EXOC3L4Q17RC7 722 aa22.26■■□□□ 1.15
MAP1LC3A-202ENST00000374837 FAM78AQ5JUQ0 283 aa22.26■■□□□ 1.15
MAP1LC3A-202ENST00000374837 STXBP5Q5T5C0 1151 aa22.26■■□□□ 1.15
MAP1LC3A-202ENST00000374837 KREMEN1Q96MU8 473 aa22.26■■□□□ 1.15
MAP1LC3A-202ENST00000374837 GPR88Q9GZN0 384 aa22.26■■□□□ 1.15
MAP1LC3A-202ENST00000374837 NAT10Q9H0A0 1025 aaKnown RBP22.26■■□□□ 1.15
MAP1LC3A-202ENST00000374837 TAB2Q9NYJ8 693 aa22.26■■□□□ 1.15
MAP1LC3A-202ENST00000374837 UXTQ9UBK9 157 aaPredicted RBP22.26■■□□□ 1.15
MAP1LC3A-202ENST00000374837 PCDHB4Q9Y5E5 795 aa22.26■■□□□ 1.15
MAP1LC3A-202ENST00000374837 NUMBLQ9Y6R0 609 aa22.26■■□□□ 1.15
MAP1LC3A-202ENST00000374837 SYCE3A1L190 88 aa22.25■■□□□ 1.15
MAP1LC3A-202ENST00000374837 BEST1O76090 585 aa22.25■■□□□ 1.15
MAP1LC3A-202ENST00000374837 PON1P27169 355 aa22.25■■□□□ 1.15
MAP1LC3A-202ENST00000374837 ZXDAP98168 799 aa22.25■■□□□ 1.15
MAP1LC3A-202ENST00000374837 TDGQ13569 410 aa22.25■■□□□ 1.15
MAP1LC3A-202ENST00000374837 GPR158Q5T848 1215 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms