RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ACOT2P49753 483 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 STILQ15468 1287 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 LMBRD2Q68DH5 695 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 PTPRN2Q92932 1015 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 RUSC1Q9BVN2 902 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 TMEM161AQ9NX61 479 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 DNERQ8NFT8 737 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 ZFYVE19Q96K21 471 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 TNIP3Q96KP6 325 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 AGAP3Q96P47 875 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 L2HGDHQ9H9P8 463 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 PIN4Q9Y237 131 aaKnown RBP12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 MYO5AQ9Y4I1 1855 aaKnown RBP12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 MYO1GB0I1T2 1018 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 TFRCP02786 760 aaKnown RBP12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 PDGFRAP16234 1089 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 COPAP53621 1224 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 CCDC15Q0P6D6 951 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 BTBD8Q5XKL5 378 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 LRRC34Q8IZ02 419 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 MYCBPAPQ8TBZ2 947 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 SYN2Q92777 582 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 OTULINQ96BN8 352 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 ELMO2Q96JJ3 720 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 MCEEQ96PE7 176 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 ERGIC2Q96RQ1 377 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 SH3GL2Q99962 352 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 WNT7AO00755 349 aa12.77□□□□□ -0.36
NPLOC4-202ENST00000374747 CAND2O75155 1236 aa12.77□□□□□ -0.36
NPLOC4-202ENST00000374747 IL18RAPO95256 599 aa12.77□□□□□ -0.36
NPLOC4-202ENST00000374747 NQO1P15559 274 aaKnown RBP12.77□□□□□ -0.36
NPLOC4-202ENST00000374747 RBP5P82980 135 aa12.77□□□□□ -0.36
NPLOC4-202ENST00000374747 PLOD1Q02809 727 aaPredicted RBP12.77□□□□□ -0.36
NPLOC4-202ENST00000374747 SH3KBP1Q96B97 665 aa12.77□□□□□ -0.36
NPLOC4-202ENST00000374747 KLF6Q99612 283 aaPredicted RBP12.77□□□□□ -0.36
NPLOC4-202ENST00000374747 EXTL3O43909 919 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 NNMTP40261 264 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 THEMIS2Q5TEJ8 643 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 EFCAB12Q6NXP0 572 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 WDR93Q6P2C0 686 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 TRAPPC11Q7Z392 1133 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 MFN1Q8IWA4 741 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 MDM1Q8TC05 714 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 SH3TC2Q8TF17 1288 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 DDI1Q8WTU0 396 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 PHF21AQ96BD5 680 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 ADAMTS7Q9UKP4 1686 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 SUPT20HL2P0C7V6 817 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 ATP6V1B1P15313 513 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 TARSP26639 723 aaKnown RBP12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 CPA2P48052 419 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 SULT1E1P49888 294 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 DNAJC3Q13217 504 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 RCN1Q15293 331 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 CHI3L2Q15782 390 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 SGSM1Q2NKQ1 1148 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 ZCWPW2Q504Y3 356 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 TTC33Q6PID6 262 aaPredicted RBP12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 MICU2Q8IYU8 434 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 FUT8Q9BYC5 575 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 TMEM8AQ9HCN3 771 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 DTNAQ9Y4J8 743 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 ALG6Q9Y672 507 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 RSPH10B2B2RC85 870 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 C5orf58C9J3I9 102 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 VWA5AO00534 786 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 WBP4O75554 376 aaKnown RBP12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 RSPH10BP0C881 870 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 VEGFAP15692 232 aaPredicted RBP12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 GEMIN4P57678 1058 aaKnown RBP12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 WDR72Q3MJ13 1102 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 EARS2Q5JPH6 523 aaKnown RBP12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 DDHD1Q8NEL9 900 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 CNBD2Q96M20 576 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 CAAP1Q9H8G2 361 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 ITM2BQ9Y287 266 aa12.77□□□□□ -0.37
NPLOC4-202ENST00000374747 KLRC1P26715 233 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 TRIM16LQ309B1 348 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 SPDYAQ5MJ70 313 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 ATF7IP2Q5U623 682 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 PPP4R4Q6NUP7 873 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 TRAF7Q6Q0C0 670 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 NIPA1Q7RTP0 329 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 PLEKHH3Q7Z736 793 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 FAM162AQ96A26 154 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 AGO4Q9HCK5 861 aaKnown RBP12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 EXOSC4Q9NPD3 245 aaKnown RBP12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 AGPAT3Q9NRZ7 376 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 IL1RAPL1Q9NZN1 696 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 TBX20Q9UMR3 447 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 A0A0U1RQJ8 604 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 LOC100653049A0A140TA62 436 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 PRPF4O43172 522 aaKnown RBP eCLIP12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 CYTH3O43739 400 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 KRT34O76011 436 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 COILP38432 576 aaPredicted RBP12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 CPT1AP50416 773 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 RAD51Q06609 339 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 NCOA4Q13772 614 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 DCAF4L1Q3SXM0 396 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms