RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 FOCADQ5VW36 1801 aa5.41□□□□□ -1.54
USP48-202ENST00000374730 UQCRHLA0A096LP55 91 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 A0A1B0GVL5 298 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 ERICH2A1L162 156 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 PRSS38A1L453 326 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 BECN2A8MW95 431 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 PRKAB2O43741 272 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 RPS6KA4O75676 772 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 MMP1P03956 469 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 UQCRHP07919 91 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 SLC3A2P08195 630 aaKnown RBP5.4□□□□□ -1.54
USP48-202ENST00000374730 PFKFB1P16118 471 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 RXRAP19793 462 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 CD69Q07108 199 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 DHX8Q14562 1220 aaKnown RBP5.4□□□□□ -1.54
USP48-202ENST00000374730 SAFBQ15424 915 aaKnown RBP eCLIP5.4□□□□□ -1.54
USP48-202ENST00000374730 CAVIN4Q5BKX8 364 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 RESP18Q5W5W9 173 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 TAS1R1Q7RTX1 841 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 CCDC186Q7Z3E2 898 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 ADGRA1Q86SQ6 560 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 GLB1L2Q8IW92 636 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 SPC24Q8NBT2 197 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 MYRIPQ8NFW9 859 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 ESR2Q92731 530 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 SLC5A5Q92911 643 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 PHKBQ93100 1093 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 AIFM3Q96NN9 605 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 SDF4Q9BRK5 362 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 FDXACB1Q9BRP7 624 aaPredicted RBP5.4□□□□□ -1.54
USP48-202ENST00000374730 MENTQ9BUN1 341 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 SLC26A6Q9BXS9 759 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 RNF26Q9BY78 433 aaPredicted RBP5.4□□□□□ -1.54
USP48-202ENST00000374730 ANKRD2Q9GZV1 360 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 FOXP1Q9H334 677 aaPredicted RBP5.4□□□□□ -1.54
USP48-202ENST00000374730 MMRN2Q9H8L6 949 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 GJB4Q9NTQ9 266 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 KLHL42Q9P2K6 505 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 TUBE1Q9UJT0 475 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 TMPRSS11EQ9UL52 423 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 PYCARDQ9ULZ3 195 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 USP18Q9UMW8 372 aa5.4□□□□□ -1.54
USP48-202ENST00000374730 MYH1P12882 1939 aa5.4□□□□□ -1.55
USP48-202ENST00000374730 A0A1W2PR48 441 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 IKBKBO14920 756 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 ORC4O43929 436 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 KDM1AO60341 852 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 TOM1O60784 492 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 WDHD1O75717 1129 aaPredicted RBP5.39□□□□□ -1.55
USP48-202ENST00000374730 CALM1P0DP23 149 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 CALM2P0DP24 149 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 CALM3P0DP25 149 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 PTGS2P35354 604 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 SYKP43405 635 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 GYG1P46976 350 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 INHBCP55103 352 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 GSDMDP57764 484 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 TPM4P67936 248 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 SLC25A3Q00325 362 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 MEF2AQ02078 507 aaPredicted RBP5.39□□□□□ -1.55
USP48-202ENST00000374730 DHCR24Q15392 516 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 ZRSR1Q15695 479 aaKnown RBP5.39□□□□□ -1.55
USP48-202ENST00000374730 DPCR1Q3MIW9 517 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 RILPL1Q5EBL4 403 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 TBC1D9BQ66K14 1250 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 SHC4Q6S5L8 630 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 MTERF4Q7Z6M4 381 aaKnown RBP5.39□□□□□ -1.55
USP48-202ENST00000374730 DRC7Q8IY82 874 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 DIS3L2Q8IYB7 885 aaKnown RBP5.39□□□□□ -1.55
USP48-202ENST00000374730 AOPEPQ8N6M6 819 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 MB21D1Q8N884 522 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 MIGA1Q8NAN2 632 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 NEU4Q8WWR8 484 aaPredicted RBP5.39□□□□□ -1.55
USP48-202ENST00000374730 CELF1Q92879 486 aaKnown RBP5.39□□□□□ -1.55
USP48-202ENST00000374730 NSUN4Q96CB9 384 aaKnown RBP5.39□□□□□ -1.55
USP48-202ENST00000374730 FAM84BQ96KN1 310 aaPredicted RBP5.39□□□□□ -1.55
USP48-202ENST00000374730 MAP7D2Q96T17 732 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 UBAC1Q9BSL1 405 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 OSBPL5Q9H0X9 879 aaPredicted RBP5.39□□□□□ -1.55
USP48-202ENST00000374730 MS4A5Q9H3V2 200 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 RBM28Q9NW13 759 aaKnown RBP5.39□□□□□ -1.55
USP48-202ENST00000374730 RAI14Q9P0K7 980 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 CLIP2Q9UDT6 1046 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 TRPS1Q9UHF7 1281 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 KCNG1Q9UIX4 513 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.39□□□□□ -1.55
USP48-202ENST00000374730 REXO2Q9Y3B8 237 aaKnown RBP5.39□□□□□ -1.55
USP48-202ENST00000374730 TNKSO95271 1327 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 LTBP1Q14766 1721 aa5.39□□□□□ -1.55
USP48-202ENST00000374730 MYH8P13535 1937 aa5.38□□□□□ -1.55
USP48-202ENST00000374730 QSER1Q2KHR3 1735 aa5.38□□□□□ -1.55
USP48-202ENST00000374730 LCHNA4D1U4 455 aa5.38□□□□□ -1.55
USP48-202ENST00000374730 SMTNL1A8MU46 457 aa5.38□□□□□ -1.55
USP48-202ENST00000374730 HOXA3O43365 443 aaPredicted RBP5.38□□□□□ -1.55
USP48-202ENST00000374730 PRPF3O43395 683 aaKnown RBP5.38□□□□□ -1.55
USP48-202ENST00000374730 STC2O76061 302 aa5.38□□□□□ -1.55
USP48-202ENST00000374730 BMP15O95972 392 aa5.38□□□□□ -1.55
USP48-202ENST00000374730 MYCLP1P12525 358 aaPredicted RBP5.38□□□□□ -1.55
USP48-202ENST00000374730 BPIP17213 487 aa5.38□□□□□ -1.55
USP48-202ENST00000374730 MARCKSP29966 332 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms