RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 EIF3EP60228 445 aaKnown RBP17.9■□□□□ 0.46
RXRB-201ENST00000374680 YWHAEP62258 255 aaKnown RBP17.9■□□□□ 0.46
RXRB-201ENST00000374680 LMNB2Q03252 620 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 PTPN11Q06124 597 aaPredicted RBP17.9■□□□□ 0.46
RXRB-201ENST00000374680 SNCBQ16143 134 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 RNASEH2BQ5TBB1 312 aaKnown RBP17.9■□□□□ 0.46
RXRB-201ENST00000374680 CENPUQ71F23 418 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 PALM2Q8IXS6 379 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 C7orf31Q8N865 590 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 GPATCH11Q8N954 259 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 SPATA18Q8TC71 538 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 NLRP7Q8WX94 980 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 MAK16Q9BXY0 300 aaKnown RBP17.9■□□□□ 0.46
RXRB-201ENST00000374680 MIS12Q9H081 205 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 TGFB3P10600 412 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 GPX6P59796 221 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 ELF3P78545 371 aaPredicted RBP17.9■□□□□ 0.46
RXRB-201ENST00000374680 MBTD1Q05BQ5 628 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 MGAT5Q09328 741 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 OVGP1Q12889 678 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 HADHQ16836 314 aaKnown RBP17.9■□□□□ 0.46
RXRB-201ENST00000374680 PPP1R15BQ5SWA1 713 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 XYLT1Q86Y38 959 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 FBXO36Q8NEA4 188 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 FAM167AQ96KS9 214 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.9■□□□□ 0.46
RXRB-201ENST00000374680 RNF8O76064 485 aa17.89■□□□□ 0.46
RXRB-201ENST00000374680 SLC25A11Q02978 314 aaKnown RBP17.89■□□□□ 0.46
RXRB-201ENST00000374680 DARS2Q6PI48 645 aaKnown RBP17.89■□□□□ 0.46
RXRB-201ENST00000374680 TRABD2AQ86V40 505 aa17.89■□□□□ 0.46
RXRB-201ENST00000374680 CPT1BQ92523 772 aa17.89■□□□□ 0.46
RXRB-201ENST00000374680 HPDLQ96IR7 371 aa17.89■□□□□ 0.46
RXRB-201ENST00000374680 SMC6Q96SB8 1091 aa17.89■□□□□ 0.46
RXRB-201ENST00000374680 FAM49AQ9H0Q0 323 aaPredicted RBP17.89■□□□□ 0.46
RXRB-201ENST00000374680 DOCK1Q14185 1865 aa17.89■□□□□ 0.45
RXRB-201ENST00000374680 SIGLEC16A6NMB1 481 aa17.89■□□□□ 0.45
RXRB-201ENST00000374680 H7C0C1 242 aa17.89■□□□□ 0.45
RXRB-201ENST00000374680 IGF2BP3O00425 579 aaKnown RBP eCLIP17.89■□□□□ 0.45
RXRB-201ENST00000374680 TMEM63AO94886 807 aa17.89■□□□□ 0.45
RXRB-201ENST00000374680 ATP5OP48047 213 aa17.89■□□□□ 0.45
RXRB-201ENST00000374680 NDST1P52848 882 aa17.89■□□□□ 0.45
RXRB-201ENST00000374680 ITIH4Q14624 930 aa17.89■□□□□ 0.45
RXRB-201ENST00000374680 LACTB2Q53H82 288 aaPredicted RBP17.89■□□□□ 0.45
RXRB-201ENST00000374680 PPP6R3Q5H9R7 873 aaPredicted RBP17.89■□□□□ 0.45
RXRB-201ENST00000374680 TSHZ1Q6ZSZ6 1077 aa17.89■□□□□ 0.45
RXRB-201ENST00000374680 FBF1Q8TES7 1133 aa17.89■□□□□ 0.45
RXRB-201ENST00000374680 AFG1LQ8WV93 481 aa17.89■□□□□ 0.45
RXRB-201ENST00000374680 KLHL29Q96CT2 875 aa17.89■□□□□ 0.45
RXRB-201ENST00000374680 PEBP4Q96S96 227 aa17.89■□□□□ 0.45
RXRB-201ENST00000374680 LBHD1Q9BQE6 289 aaPredicted RBP17.89■□□□□ 0.45
RXRB-201ENST00000374680 FZD8Q9H461 694 aa17.89■□□□□ 0.45
RXRB-201ENST00000374680 IFT122Q9HBG6 1241 aa17.89■□□□□ 0.45
RXRB-201ENST00000374680 USP18Q9UMW8 372 aa17.89■□□□□ 0.45
RXRB-201ENST00000374680 C3orf70A6NLC5 250 aaPredicted RBP17.88■□□□□ 0.45
RXRB-201ENST00000374680 E5RJQ4 531 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 LSM8O95777 96 aaKnown RBP17.88■□□□□ 0.45
RXRB-201ENST00000374680 PDGFRAP16234 1089 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 IL9RQ01113 521 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 IGDCC3Q8IVU1 814 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 SCUBE3Q8IX30 993 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 GPC2Q8N158 579 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 TRIM56Q9BRZ2 755 aaKnown RBP17.88■□□□□ 0.45
RXRB-201ENST00000374680 B3GNT5Q9BYG0 378 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 PTPRHQ9HD43 1115 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 KLHL14Q9P2G3 628 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 XPO7Q9UIA9 1087 aaKnown RBP17.88■□□□□ 0.45
RXRB-201ENST00000374680 DCTN4Q9UJW0 460 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 RPSAP08865 295 aaKnown RBP17.88■□□□□ 0.45
RXRB-201ENST00000374680 ARF4P18085 180 aaPredicted RBP17.88■□□□□ 0.45
RXRB-201ENST00000374680 SEPT7Q16181 437 aaKnown RBP17.88■□□□□ 0.45
RXRB-201ENST00000374680 SLC10A6Q3KNW5 377 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 ZC3H12AQ5D1E8 599 aaKnown RBP17.88■□□□□ 0.45
RXRB-201ENST00000374680 NOL9Q5SY16 702 aaKnown RBP17.88■□□□□ 0.45
RXRB-201ENST00000374680 HHATQ5VTY9 493 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 CDCA2Q69YH5 1023 aaPredicted RBP17.88■□□□□ 0.45
RXRB-201ENST00000374680 SUGP1Q8IWZ8 645 aaKnown RBP17.88■□□□□ 0.45
RXRB-201ENST00000374680 RXFP2Q8WXD0 754 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 TMEM176AQ96HP8 235 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 CLUHO75153 1309 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 PPEF2O14830 753 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 AP3M2P53677 418 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 ZNF449Q6P9G9 518 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 ACOT1Q86TX2 421 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 SMARCAD1Q9H4L7 1026 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 CCDC134Q9H6E4 229 aa17.88■□□□□ 0.45
RXRB-201ENST00000374680 NEFHP12036 1026 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 ADCYAP1R1P41586 468 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 KIZQ2M2Z5 673 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 TRNP1Q6NT89 227 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 LVRNQ6Q4G3 990 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 ECHDC2Q86YB7 292 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 SLC35B2Q8TB61 432 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 OPTNQ96CV9 577 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 TMEM237Q96Q45 408 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 C2orf40Q9H1Z8 148 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 DDX56Q9NY93 547 aaKnown RBP17.87■□□□□ 0.45
RXRB-201ENST00000374680 ARL2BPQ9Y2Y0 163 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 FAM155BO75949 473 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 FGFR1P11362 822 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 ATXN1P54253 815 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms