RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 SPATA17Q96L03 361 aa12.78□□□□□ -0.36
HDAC8-201ENST00000373554 C8orf48Q96LL4 319 aa12.78□□□□□ -0.36
HDAC8-201ENST00000373554 KXD1Q9BQD3 176 aa12.78□□□□□ -0.36
HDAC8-201ENST00000373554 B3GNT5Q9BYG0 378 aa12.78□□□□□ -0.36
HDAC8-201ENST00000373554 SMOC2Q9H3U7 446 aa12.78□□□□□ -0.36
HDAC8-201ENST00000373554 THAP9Q9H5L6 903 aa12.78□□□□□ -0.36
HDAC8-201ENST00000373554 ZFP14Q9HCL3 533 aa12.78□□□□□ -0.36
HDAC8-201ENST00000373554 CISHQ9NSE2 258 aa12.78□□□□□ -0.36
HDAC8-201ENST00000373554 ZMYM5Q9UJ78 669 aa12.78□□□□□ -0.36
HDAC8-201ENST00000373554 TMEM221A6NGB7 291 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 PRR33A8MZF0 331 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 F8VP50 259 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 M0R296 226 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 CLDN5O00501 218 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 CILPO75339 1184 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 ECI2O75521 394 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 SRFP11831 508 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 TBXAS1P24557 533 aaPredicted RBP12.77□□□□□ -0.37
HDAC8-201ENST00000373554 YWHAEP62258 255 aaKnown RBP12.77□□□□□ -0.37
HDAC8-201ENST00000373554 CYP4F8P98187 520 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 KCNH2Q12809 1159 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 CUL2Q13617 745 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 FAM78AQ5JUQ0 283 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 GPR158Q5T848 1215 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 DENND5BQ6ZUT9 1274 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 ST13P5Q8NFI4 369 aaPredicted RBP12.77□□□□□ -0.37
HDAC8-201ENST00000373554 SLC2A14Q8TDB8 520 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 MRPS31Q92665 395 aaKnown RBP12.77□□□□□ -0.37
HDAC8-201ENST00000373554 TATDN2Q93075 761 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 ELSPBP1Q96BH3 223 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 MYRFLQ96LU7 910 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 ASB16Q96NS5 453 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 NT5C1BQ96P26 610 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 MED15Q96RN5 788 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 TWNKQ96RR1 684 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 ARID3AQ99856 593 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 TASP1Q9H6P5 420 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 IL21Q9HBE4 155 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 DMAP1Q9NPF5 467 aaPredicted RBP12.77□□□□□ -0.37
HDAC8-201ENST00000373554 C11orf16Q9NQ32 467 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 KRT82Q9NSB4 513 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 FAM49BQ9NUQ9 324 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 FBXL21Q9UKT6 434 aa12.77□□□□□ -0.37
HDAC8-201ENST00000373554 NRG2O14511 850 aaPredicted RBP12.76□□□□□ -0.37
HDAC8-201ENST00000373554 NARSO43776 548 aaKnown RBP12.76□□□□□ -0.37
HDAC8-201ENST00000373554 CCDC130P13994 396 aa12.76□□□□□ -0.37
HDAC8-201ENST00000373554 DDX6P26196 483 aaKnown RBP eCLIP12.76□□□□□ -0.37
HDAC8-201ENST00000373554 MTIF2P46199 727 aaKnown RBP12.76□□□□□ -0.37
HDAC8-201ENST00000373554 LRMPQ12912 555 aa12.76□□□□□ -0.37
HDAC8-201ENST00000373554 STX1AQ16623 288 aa12.76□□□□□ -0.37
HDAC8-201ENST00000373554 ZNF394Q53GI3 561 aa12.76□□□□□ -0.37
HDAC8-201ENST00000373554 STXBP5Q5T5C0 1151 aa12.76□□□□□ -0.37
HDAC8-201ENST00000373554 FUKQ8N0W3 1084 aa12.76□□□□□ -0.37
HDAC8-201ENST00000373554 PPM1KQ8N3J5 372 aa12.76□□□□□ -0.37
HDAC8-201ENST00000373554 E2F7Q96AV8 911 aa12.76□□□□□ -0.37
HDAC8-201ENST00000373554 ZSWIM3Q96MP5 696 aa12.76□□□□□ -0.37
HDAC8-201ENST00000373554 ANO10Q9NW15 660 aa12.76□□□□□ -0.37
HDAC8-201ENST00000373554 PTPRDP23468 1912 aa12.76□□□□□ -0.37
HDAC8-201ENST00000373554 AP1G2O75843 785 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 F11P03951 625 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 CFHP08603 1231 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 FAM200BP0CF97 657 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 FCARP24071 287 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 ADORA2BP29275 332 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 AVPR1AP37288 418 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 CACNA2D1P54289 1103 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 TANGO2Q6ICL3 276 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 POTEHQ6S545 545 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 TMEM150AQ86TG1 271 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 ARID3BQ8IVW6 561 aaPredicted RBP12.75□□□□□ -0.37
HDAC8-201ENST00000373554 C12orf29Q8N999 325 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 WHAMMQ8TF30 809 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 DEPDC1BQ8WUY9 529 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 CYFIP2Q96F07 1278 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 ASIC4Q96FT7 647 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 TMEM176AQ96HP8 235 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 HEXIM2Q96MH2 286 aaKnown RBP12.75□□□□□ -0.37
HDAC8-201ENST00000373554 HNRNPABQ99729 332 aaKnown RBP12.75□□□□□ -0.37
HDAC8-201ENST00000373554 LRFN3Q9BTN0 628 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 RPP25Q9BUL9 199 aaKnown RBP12.75□□□□□ -0.37
HDAC8-201ENST00000373554 TRPV4Q9HBA0 871 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 SLC2A4RGQ9NR83 387 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 TMEM30AQ9NV96 361 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 GCNT4Q9P109 453 aa12.75□□□□□ -0.37
HDAC8-201ENST00000373554 SOBPA7XYQ1 873 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 DPYSL4O14531 572 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 RTN3O95197 1032 aaPredicted RBP12.74□□□□□ -0.37
HDAC8-201ENST00000373554 PTMSP20962 102 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 PFKPQ01813 784 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 MAN2A1Q16706 1144 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 HFE2Q6ZVN8 426 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 PAQR9Q6ZVX9 377 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 BMP8AQ7Z5Y6 402 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 IRF2BP1Q8IU81 584 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 SUGP1Q8IWZ8 645 aaKnown RBP12.74□□□□□ -0.37
HDAC8-201ENST00000373554 NUP93Q8N1F7 819 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 MAB21L3Q8N8X9 362 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 EHBP1Q8NDI1 1231 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 ENOX1Q8TC92 643 aaKnown RBP12.74□□□□□ -0.37
HDAC8-201ENST00000373554 PBXIP1Q96AQ6 731 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms