RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 ERMNQ8TAM6 284 aa5.69□□□□□ -1.5
ATG4A-204ENST00000372246 NSL1Q96IY1 281 aa5.69□□□□□ -1.5
ATG4A-204ENST00000372246 PPP1R36Q96LQ0 422 aa5.69□□□□□ -1.5
ATG4A-204ENST00000372246 AGBL1Q96MI9 1066 aa5.69□□□□□ -1.5
ATG4A-204ENST00000372246 PAFAH2Q99487 392 aa5.69□□□□□ -1.5
ATG4A-204ENST00000372246 TSSK1BQ9BXA7 367 aa5.69□□□□□ -1.5
ATG4A-204ENST00000372246 SPATA16Q9BXB7 569 aa5.69□□□□□ -1.5
ATG4A-204ENST00000372246 MAF1Q9H063 256 aa5.69□□□□□ -1.5
ATG4A-204ENST00000372246 XPNPEP1Q9NQW7 623 aa5.69□□□□□ -1.5
ATG4A-204ENST00000372246 OLFML3Q9NRN5 406 aa5.69□□□□□ -1.5
ATG4A-204ENST00000372246 PIH1D1Q9NWS0 290 aaKnown RBP5.69□□□□□ -1.5
ATG4A-204ENST00000372246 HSFX1Q9UBD0 423 aa5.69□□□□□ -1.5
ATG4A-204ENST00000372246 PPARGC1AQ9UBK2 798 aaKnown RBP5.69□□□□□ -1.5
ATG4A-204ENST00000372246 SLC7A8Q9UHI5 535 aa5.69□□□□□ -1.5
ATG4A-204ENST00000372246 ADAMTS6Q9UKP5 1117 aa5.69□□□□□ -1.5
ATG4A-204ENST00000372246 SYNPO2Q9UMS6 1093 aa5.69□□□□□ -1.5
ATG4A-204ENST00000372246 COL22A1Q8NFW1 1626 aaPredicted RBP5.69□□□□□ -1.5
ATG4A-204ENST00000372246 ZNF335Q9H4Z2 1342 aaPredicted RBP5.68□□□□□ -1.5
ATG4A-204ENST00000372246 LOC100653049A0A140TA62 436 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 DENND3A2RUS2 1198 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 ARHGEF35A5YM69 484 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 MOXD2PA6NHM9 499 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 C2CD2LO14523 706 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 CCDC22O60826 627 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 GAS7O60861 476 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 KRT34O76011 436 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 DXOO77932 396 aaKnown RBP5.68□□□□□ -1.5
ATG4A-204ENST00000372246 DLDP09622 509 aaKnown RBP5.68□□□□□ -1.5
ATG4A-204ENST00000372246 C6orf222P0C671 652 aaPredicted RBP5.68□□□□□ -1.5
ATG4A-204ENST00000372246 MUTP22033 750 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 RPL10P27635 214 aaKnown RBP5.68□□□□□ -1.5
ATG4A-204ENST00000372246 PCSK6P29122 969 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 GSTO1P78417 241 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 AP1B1Q10567 949 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 MSLNQ13421 630 aaPredicted RBP5.68□□□□□ -1.5
ATG4A-204ENST00000372246 STAT4Q14765 748 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 MYBPC3Q14896 1274 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 LAPTM4AQ15012 233 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 PPP2R5EQ16537 467 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.68□□□□□ -1.5
ATG4A-204ENST00000372246 CYP4A22Q5TCH4 519 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 VWA5B1Q5TIE3 1220 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 C1orf146Q5VVC0 180 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 ACAD10Q6JQN1 1059 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 FOXR2Q6PJQ5 311 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 FBXO11Q86XK2 927 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 CPNE9Q8IYJ1 553 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 HACE1Q8IYU2 909 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 MCOLN2Q8IZK6 566 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 FBXO36Q8NEA4 188 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 IL31RAQ8NI17 732 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 AGR3Q8TD06 166 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 MPP4Q96JB8 637 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 SYNCQ9H7C4 482 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 ZWILCHQ9H900 591 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 ZNF287Q9HBT7 754 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 FBXO28Q9NVF7 368 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 DNAAF2Q9NVR5 837 aaKnown RBP5.68□□□□□ -1.5
ATG4A-204ENST00000372246 ANKFY1Q9P2R3 1169 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 ZNF536O15090 1300 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 PTPRJQ12913 1337 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 ATRNL1Q5VV63 1379 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 ARHGAP42A6NI28 874 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 CXorf49A8MYA2 514 aaPredicted RBP5.68□□□□□ -1.5
ATG4A-204ENST00000372246 NRG2O14511 850 aaPredicted RBP5.68□□□□□ -1.5
ATG4A-204ENST00000372246 MAGEB2O15479 319 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 ECE2O60344 883 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 TMEM63AO94886 807 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 NDUFB10O96000 172 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 LDHCP07864 332 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 RARBP10826 455 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 HSPA6P17066 643 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 NDUFV2P19404 249 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 GALK1P51570 392 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 PGGT1BP53609 377 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 PSMC5P62195 406 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 ZNF252P-AS1Q0IIN9 211 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 CLEC16AQ2KHT3 1053 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 LIN52Q52LA3 116 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 SLC45A4Q5BKX6 768 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 ZBTB41Q5SVQ8 909 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 CDC42EP5Q6NZY7 148 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 NPNTQ6UXI9 565 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 DENND5BQ6ZUT9 1274 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 SH3BP5LQ7L8J4 393 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 ULK2Q8IYT8 1036 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 UNC5BQ8IZJ1 945 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 ZCCHC9Q8N567 271 aaKnown RBP5.68□□□□□ -1.5
ATG4A-204ENST00000372246 RNF148Q8N7C7 305 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 TTLL6Q8N841 843 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 SLC26A7Q8TE54 656 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 SKA1Q96BD8 255 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 OXNAD1Q96HP4 312 aaPredicted RBP5.68□□□□□ -1.5
ATG4A-204ENST00000372246 NT5C1BQ96P26 610 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 GCNAQ96QF7 691 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 ECSITQ9BQ95 431 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 CCDC77Q9BR77 488 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 WDR11Q9BZH6 1224 aa5.68□□□□□ -1.5
ATG4A-204ENST00000372246 ASCC2Q9H1I8 757 aaPredicted RBP5.68□□□□□ -1.5
ATG4A-204ENST00000372246 TLE6Q9H808 572 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms