RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 PDGFRLQ15198 375 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 ZNF667Q5HYK9 610 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 DENND5BQ6ZUT9 1274 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 KIAA1958Q8N8K9 716 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 KIAA0895Q8NCT3 520 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 TMC2Q8TDI7 906 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 MYLPFQ96A32 169 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 C8orf48Q96LL4 319 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 KCTD10Q9H3F6 313 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 TRAF3IP3Q9Y228 551 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 R4GN57 208 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 A8MXQ7 604 aa20.15■□□□□ 0.82
TMEM53-201ENST00000372235 NR3C1P04150 777 aa20.15■□□□□ 0.82
TMEM53-201ENST00000372235 GPR15P49685 360 aa20.15■□□□□ 0.82
TMEM53-201ENST00000372235 MYL6P60660 151 aa20.15■□□□□ 0.82
TMEM53-201ENST00000372235 PSMC1P62191 440 aaKnown RBP20.15■□□□□ 0.82
TMEM53-201ENST00000372235 NOP14P78316 857 aaKnown RBP20.15■□□□□ 0.82
TMEM53-201ENST00000372235 KCNB1Q14721 858 aa20.15■□□□□ 0.82
TMEM53-201ENST00000372235 NFIL3Q16649 462 aa20.15■□□□□ 0.82
TMEM53-201ENST00000372235 SGSM1Q2NKQ1 1148 aa20.15■□□□□ 0.82
TMEM53-201ENST00000372235 ZNF699Q32M78 642 aa20.15■□□□□ 0.82
TMEM53-201ENST00000372235 TXNDC8Q6A555 127 aa20.15■□□□□ 0.82
TMEM53-201ENST00000372235 SPEM1Q8N4L4 309 aa20.15■□□□□ 0.82
TMEM53-201ENST00000372235 ZBTB44Q8NCP5 570 aa20.15■□□□□ 0.82
TMEM53-201ENST00000372235 NELL1Q92832 810 aa20.15■□□□□ 0.82
TMEM53-201ENST00000372235 USP13Q92995 863 aaPredicted RBP20.15■□□□□ 0.82
TMEM53-201ENST00000372235 PCED1BQ96HM7 432 aa20.15■□□□□ 0.82
TMEM53-201ENST00000372235 CRTAC1Q9NQ79 661 aa20.15■□□□□ 0.82
TMEM53-201ENST00000372235 GTSE1Q9NYZ3 720 aa20.15■□□□□ 0.82
TMEM53-201ENST00000372235 TRPM5Q9NZQ8 1165 aa20.15■□□□□ 0.82
TMEM53-201ENST00000372235 NXF1Q9UBU9 619 aaKnown RBP20.15■□□□□ 0.82
TMEM53-201ENST00000372235 ZDHHC9Q9Y397 364 aa20.15■□□□□ 0.82
TMEM53-201ENST00000372235 NCANO14594 1321 aa20.15■□□□□ 0.82
TMEM53-201ENST00000372235 TICRRQ7Z2Z1 1910 aa20.14■□□□□ 0.81
TMEM53-201ENST00000372235 COL4A2P08572 1712 aa20.14■□□□□ 0.81
TMEM53-201ENST00000372235 CKMP06732 381 aa20.14■□□□□ 0.81
TMEM53-201ENST00000372235 TCF3P15923 654 aa20.14■□□□□ 0.81
TMEM53-201ENST00000372235 PTPN1P18031 435 aaKnown RBP20.14■□□□□ 0.81
TMEM53-201ENST00000372235 BDNFP23560 247 aa20.14■□□□□ 0.81
TMEM53-201ENST00000372235 CXCL12P48061 93 aa20.14■□□□□ 0.81
TMEM53-201ENST00000372235 CDR1P51861 262 aa20.14■□□□□ 0.81
TMEM53-201ENST00000372235 NDUFA8P51970 172 aa20.14■□□□□ 0.81
TMEM53-201ENST00000372235 RUNX3Q13761 415 aa20.14■□□□□ 0.81
TMEM53-201ENST00000372235 NCOA4Q13772 614 aa20.14■□□□□ 0.81
TMEM53-201ENST00000372235 KRBA2Q6ZNG9 492 aa20.14■□□□□ 0.81
TMEM53-201ENST00000372235 GPR161Q8N6U8 529 aaKnown RBP20.14■□□□□ 0.81
TMEM53-201ENST00000372235 CCDC26Q8TAB7 109 aa20.14■□□□□ 0.81
TMEM53-201ENST00000372235 ZNF516Q92618 1163 aa20.14■□□□□ 0.81
TMEM53-201ENST00000372235 RUBCNQ92622 972 aa20.14■□□□□ 0.81
TMEM53-201ENST00000372235 FAM84AQ96KN4 292 aa20.14■□□□□ 0.81
TMEM53-201ENST00000372235 LRRC3BQ96PB8 259 aa20.14■□□□□ 0.81
TMEM53-201ENST00000372235 FAM83CQ9BQN1 747 aa20.14■□□□□ 0.81
TMEM53-201ENST00000372235 GTPBP4Q9BZE4 634 aaKnown RBP20.14■□□□□ 0.81
TMEM53-201ENST00000372235 GKN1Q9NS71 199 aa20.14■□□□□ 0.81
TMEM53-201ENST00000372235 PATJQ8NI35 1801 aa20.13■□□□□ 0.81
TMEM53-201ENST00000372235 GOLGA6L4A6NEF3 574 aa20.13■□□□□ 0.81
TMEM53-201ENST00000372235 ATP2C2O75185 946 aa20.13■□□□□ 0.81
TMEM53-201ENST00000372235 NUCB2P80303 420 aa20.13■□□□□ 0.81
TMEM53-201ENST00000372235 GRSF1Q12849 480 aaKnown RBP eCLIP20.13■□□□□ 0.81
TMEM53-201ENST00000372235 NR1H3Q13133 447 aa20.13■□□□□ 0.81
TMEM53-201ENST00000372235 MDH1BQ5I0G3 518 aa20.13■□□□□ 0.81
TMEM53-201ENST00000372235 SDHAF4Q5VUM1 108 aa20.13■□□□□ 0.81
TMEM53-201ENST00000372235 TDRD10Q5VZ19 366 aaKnown RBP20.13■□□□□ 0.81
TMEM53-201ENST00000372235 SCARA3Q6AZY7 606 aa20.13■□□□□ 0.81
TMEM53-201ENST00000372235 INTS8Q75QN2 995 aaKnown RBP20.13■□□□□ 0.81
TMEM53-201ENST00000372235 GPIHBP1Q8IV16 184 aa20.13■□□□□ 0.81
TMEM53-201ENST00000372235 B3GALNT2Q8NCR0 500 aa20.13■□□□□ 0.81
TMEM53-201ENST00000372235 ZFYVE19Q96K21 471 aa20.13■□□□□ 0.81
TMEM53-201ENST00000372235 SLITRK1Q96PX8 696 aa20.13■□□□□ 0.81
TMEM53-201ENST00000372235 HINFPQ9BQA5 517 aa20.13■□□□□ 0.81
TMEM53-201ENST00000372235 MRPL45Q9BRJ2 306 aaKnown RBP20.13■□□□□ 0.81
TMEM53-201ENST00000372235 IMPG2Q9BZV3 1241 aa20.13■□□□□ 0.81
TMEM53-201ENST00000372235 XYLT2Q9H1B5 865 aa20.13■□□□□ 0.81
TMEM53-201ENST00000372235 TRPC7Q9HCX4 862 aa20.13■□□□□ 0.81
TMEM53-201ENST00000372235 LRRIQ3A6PVS8 624 aaPredicted RBP20.12■□□□□ 0.81
TMEM53-201ENST00000372235 ATG13O75143 517 aa20.12■□□□□ 0.81
TMEM53-201ENST00000372235 ZNF202O95125 648 aa20.12■□□□□ 0.81
TMEM53-201ENST00000372235 RTN3O95197 1032 aaPredicted RBP20.12■□□□□ 0.81
TMEM53-201ENST00000372235 PAPSS2O95340 614 aaPredicted RBP20.12■□□□□ 0.81
TMEM53-201ENST00000372235 C4BPAP04003 597 aaKnown RBP20.12■□□□□ 0.81
TMEM53-201ENST00000372235 KRT13P13646 458 aa20.12■□□□□ 0.81
TMEM53-201ENST00000372235 HDCP19113 662 aa20.12■□□□□ 0.81
TMEM53-201ENST00000372235 DPYDQ12882 1025 aa20.12■□□□□ 0.81
TMEM53-201ENST00000372235 CEP135Q66GS9 1140 aa20.12■□□□□ 0.81
TMEM53-201ENST00000372235 GUF1Q8N442 669 aaKnown RBP20.12■□□□□ 0.81
TMEM53-201ENST00000372235 CPA6Q8N4T0 437 aa20.12■□□□□ 0.81
TMEM53-201ENST00000372235 PDZD8Q8NEN9 1154 aa20.12■□□□□ 0.81
TMEM53-201ENST00000372235 ATP2A3Q93084 1043 aa20.12■□□□□ 0.81
TMEM53-201ENST00000372235 TTLL2Q9BWV7 592 aa20.12■□□□□ 0.81
TMEM53-201ENST00000372235 SMG9Q9H0W8 520 aaKnown RBP20.12■□□□□ 0.81
TMEM53-201ENST00000372235 RMND1Q9NWS8 449 aa20.12■□□□□ 0.81
TMEM53-201ENST00000372235 HOOK1Q9UJC3 728 aaKnown RBP20.12■□□□□ 0.81
TMEM53-201ENST00000372235 LILRB5O75023 590 aa20.11■□□□□ 0.81
TMEM53-201ENST00000372235 CNR2P34972 360 aa20.11■□□□□ 0.81
TMEM53-201ENST00000372235 MTF1Q14872 753 aa20.11■□□□□ 0.81
TMEM53-201ENST00000372235 ZACNQ401N2 412 aa20.11■□□□□ 0.81
TMEM53-201ENST00000372235 UNC93AQ86WB7 457 aa20.11■□□□□ 0.81
TMEM53-201ENST00000372235 CCDC150Q8NCX0 1101 aa20.11■□□□□ 0.81
TMEM53-201ENST00000372235 STKLD1Q8NE28 680 aa20.11■□□□□ 0.81
TMEM53-201ENST00000372235 OSCP1Q8WVF1 389 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms