RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 VHLP40337 213 aa24.84■■□□□ 1.57
RAPGEF1-203ENST00000372195 LSM7Q9UK45 103 aaKnown RBP24.84■■□□□ 1.57
RAPGEF1-203ENST00000372195 ENDOD1O94919 500 aa24.84■■□□□ 1.57
RAPGEF1-203ENST00000372195 ACADSBP45954 432 aa24.84■■□□□ 1.57
RAPGEF1-203ENST00000372195 PDIA6Q15084 440 aa24.84■■□□□ 1.57
RAPGEF1-203ENST00000372195 WDCPQ9H6R7 721 aa24.84■■□□□ 1.57
RAPGEF1-203ENST00000372195 ALDH1A1P00352 501 aa24.84■■□□□ 1.57
RAPGEF1-203ENST00000372195 CENPAP49450 140 aa24.84■■□□□ 1.57
RAPGEF1-203ENST00000372195 GID8Q9NWU2 228 aa24.84■■□□□ 1.57
RAPGEF1-203ENST00000372195 CLASP2O75122 1294 aaKnown RBP24.84■■□□□ 1.57
RAPGEF1-203ENST00000372195 ST8SIA6P61647 398 aa24.84■■□□□ 1.57
RAPGEF1-203ENST00000372195 ZNF677Q86XU0 584 aa24.84■■□□□ 1.57
RAPGEF1-203ENST00000372195 RIBC1Q8N443 379 aaPredicted RBP24.84■■□□□ 1.57
RAPGEF1-203ENST00000372195 IER5Q5VY09 327 aa24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 HHIPL2Q6UWX4 724 aa24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 NLRP9Q7RTR0 991 aa24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 PGK2P07205 417 aa24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 SCTRP47872 440 aa24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 SKIV2LQ15477 1246 aaKnown RBP24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 EFHC1Q5JVL4 640 aa24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 STX19Q8N4C7 294 aa24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 MYCBPAPQ8TBZ2 947 aa24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 USE1Q9NZ43 259 aa24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 VTNP04004 478 aa24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 TAF1CQ15572 869 aaPredicted RBP24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 SELENONQ9NZV5 590 aa24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 RPS6KL1Q9Y6S9 549 aa24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 OTOAQ7RTW8 1153 aa24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 SCFD2Q8WU76 684 aa24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 MYOZ2Q9NPC6 264 aa24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 SH3BP1Q9Y3L3 701 aa24.83■■□□□ 1.57
RAPGEF1-203ENST00000372195 SUPT7LO94864 414 aa24.83■■□□□ 1.56
RAPGEF1-203ENST00000372195 FAM200BP0CF97 657 aa24.83■■□□□ 1.56
RAPGEF1-203ENST00000372195 TTC33Q6PID6 262 aaPredicted RBP24.83■■□□□ 1.56
RAPGEF1-203ENST00000372195 TMCO5AQ8N6Q1 288 aa24.83■■□□□ 1.56
RAPGEF1-203ENST00000372195 CYP11B1P15538 503 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 OTUD4Q01804 1114 aaKnown RBP24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 ATP8B4Q8TF62 1192 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 ZBTB10Q96DT7 871 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 PABPC3Q9H361 631 aaKnown RBP24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 SPTLC1O15269 473 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 YY1P25490 414 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 TKFCQ3LXA3 575 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 HASPINQ8TF76 798 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 RIT2Q99578 217 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 CINPQ9BW66 212 aaPredicted RBP24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 CHST12Q9NRB3 414 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 DDIT4Q9NX09 232 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 NSMCE4AQ9NXX6 385 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 IMPDH2P12268 514 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 HOXD10P28358 340 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 SLC9A5Q14940 896 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 CLEC16AQ2KHT3 1053 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 LRRC8BQ6P9F7 803 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 ZNF571Q7Z3V5 609 aaPredicted RBP24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 MTDHQ86UE4 582 aaKnown RBP24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 ECSITQ9BQ95 431 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 THUMPD3Q9BV44 507 aaKnown RBP24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 RNF112Q9ULX5 631 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 PXDNLA1KZ92 1463 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 PSTPIP1O43586 416 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 SPAG6O75602 509 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 BGNP21810 368 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 ACER1Q8TDN7 264 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 MAGEB18Q96M61 343 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 GIT2Q14161 759 aa24.82■■□□□ 1.56
RAPGEF1-203ENST00000372195 C19orf81C9J6K1 198 aa24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 ENTPD3O75355 529 aa24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 EPB42P16452 691 aa24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 CALML6Q8TD86 181 aa24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 MKNK1Q9BUB5 465 aa24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 CDC42EP4Q9H3Q1 356 aaKnown RBP24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 PIH1D1Q9NWS0 290 aaKnown RBP24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 DTNAQ9Y4J8 743 aa24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 LINC00854A0A1B0GVQ3 168 aa24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 SLC30A10Q6XR72 485 aa24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 USP6NLQ92738 828 aa24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 ERAP1Q9NZ08 941 aa24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 M0R3G1 203 aa24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 CLK1P49759 484 aaKnown RBP24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 PRPF18Q99633 342 aaKnown RBP24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 PRG3Q9Y2Y8 225 aaPredicted RBP24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 PARNO95453 639 aaKnown RBP24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 CDH2P19022 906 aaPredicted RBP24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 PAWRQ96IZ0 340 aaKnown RBP24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 LACRTQ9GZZ8 138 aa24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 UBP1Q9NZI7 540 aa24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 H2AFY2Q9P0M6 372 aaPredicted RBP24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 TMEM120AQ9BXJ8 343 aa24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 CEP41Q9BYV8 373 aa24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 WWOXQ9NZC7 414 aa24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 SPASTQ9UBP0 616 aa24.81■■□□□ 1.56
RAPGEF1-203ENST00000372195 SERPINI2O75830 405 aa24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 DDX39BQ13838 428 aaKnown RBP24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 PLEKHM3Q6ZWE6 761 aa24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 PGBD3Q8N328 593 aa24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 CSDE1O75534 798 aaKnown RBP24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 PTK6Q13882 451 aa24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 PAN2Q504Q3 1202 aaKnown RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms