RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PTPRAP18433 802 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 PAX3P23760 479 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 KCNA1Q09470 495 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 ANO4Q32M45 955 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 RAD9BQ6WBX8 426 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 ATPAF2Q8N5M1 289 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 SLC7A14Q8TBB6 771 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 UBA3Q8TBC4 463 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 SLC40A1Q9NP59 571 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 GPRC5CQ9NQ84 441 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 UVRAGQ9P2Y5 699 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 MCM8Q9UJA3 840 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 TBKBP1A7MCY6 615 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 PDE5AO76074 875 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 FAM107AO95990 144 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 EFHC1Q5JVL4 640 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 C10orf120Q5SQS8 335 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 DAB2IPQ5VWQ8 1189 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 IL31Q6EBC2 164 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 CHADLQ6NUI6 762 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 TMEM154Q6P9G4 183 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 ABHD16BQ9H3Z7 469 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 NAGPAQ9UK23 515 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 CCT8L1PA6NM43 557 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 PQBP1O60828 265 aaKnown RBP13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 KCNA3P22001 575 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 IL10P22301 178 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 FXR1P51114 621 aaKnown RBP eCLIP13.86□□□□□ -0.198e-6■■■□□ 16.6
RAPGEF1-201ENST00000372189 EIF3EP60228 445 aaKnown RBP13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 PIGHQ14442 188 aaPredicted RBP13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 HABP4Q5JVS0 413 aaKnown RBP13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 PCDHB2Q9Y5E7 798 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 CDH16O75309 829 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 MTRF1O75570 445 aaKnown RBP13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 HOXC6P09630 235 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 GRIK4Q16099 956 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 RABGAP1LQ5R372 815 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 SLC30A10Q6XR72 485 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 ARL8AQ96BM9 186 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 ZIM3Q96PE6 472 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 MRIQ9BWK5 157 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 AGPAT3Q9NRZ7 376 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 RBM12Q9NTZ6 932 aaKnown RBP13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 SETD4Q9NVD3 440 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 ENO1P06733 434 aaKnown RBP13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 EFR3AQ14156 821 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 CNGA3Q16281 694 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 PTGISQ16647 500 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 RNASE11Q8TAA1 199 aaKnown RBP13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 PBXIP1Q96AQ6 731 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 MTBPQ96DY7 904 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 PI4K2AQ9BTU6 479 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 ROPN1BQ9BZX4 212 aaPredicted RBP13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 ROPN1Q9HAT0 212 aaPredicted RBP13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 TMEM39AQ9NV64 488 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 A0A1W2PQJ5 194 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 ZC3H11AO75152 810 aaKnown RBP eCLIP13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 B3GAT3O94766 335 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 HNRNPH1P31943 449 aaKnown RBP13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 RIN2Q8WYP3 895 aaPredicted RBP13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 TRIM51Q9BSJ1 452 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 TSSK1BQ9BXA7 367 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 SLC13A4Q9UKG4 626 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 GTF2H1P32780 548 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 ALDH18A1P54886 795 aaKnown RBP13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 MFSD10Q14728 455 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 GPAT2Q6NUI2 795 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 C4orf19Q8IY42 314 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 OR6P1Q8NGX9 317 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 CALML6Q8TD86 181 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 DNAJC9Q8WXX5 260 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 TUBB1Q9H4B7 451 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 IL17RBQ9NRM6 502 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 NDFIP2Q9NV92 336 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 URODP06132 367 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 DEFB115Q30KQ5 88 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 NAIF1Q69YI7 327 aaPredicted RBP13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 LRRC8EQ6NSJ5 796 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 PTF1AQ7RTS3 328 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 ZNF677Q86XU0 584 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 ZFPM1Q8IX07 1006 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 DCUN1D1Q96GG9 259 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 CATSPERBQ9H7T0 1116 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 UBA6A0AVT1 1052 aaPredicted RBP13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 PSMD3O43242 534 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 C4BPBP20851 252 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 SERPINB1P30740 379 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 NPTX2P47972 431 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 ACVR2BQ13705 512 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 FHOD1Q9Y613 1164 aa13.85□□□□□ -0.19
RAPGEF1-201ENST00000372189 RGS20O76081 388 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 MRPS35P82673 323 aaKnown RBP13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 SEZ6Q53EL9 994 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 SLC35G2Q8TBE7 412 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 KLHL11Q9NVR0 708 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 CAMTA1Q9Y6Y1 1673 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 FAM47DPA6NHR8 397 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 TYK2P29597 1187 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 C3orf20Q8ND61 904 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms