RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 EPHB4P54760 987 aa19.49■□□□□ 0.71
VEGFA-206ENST00000372077 LLGL1Q15334 1064 aa19.49■□□□□ 0.71
VEGFA-206ENST00000372077 STILQ15468 1287 aa19.49■□□□□ 0.71
VEGFA-206ENST00000372077 COL13A1Q5TAT6 717 aaPredicted RBP19.49■□□□□ 0.71
VEGFA-206ENST00000372077 DDX42Q86XP3 938 aaKnown RBP eCLIP19.49■□□□□ 0.714e-7■■■□□ 18.2
VEGFA-206ENST00000372077 TRIM58Q8NG06 486 aa19.49■□□□□ 0.71
VEGFA-206ENST00000372077 COLEC11Q9BWP8 271 aa19.49■□□□□ 0.71
VEGFA-206ENST00000372077 DNAI2Q9GZS0 605 aa19.49■□□□□ 0.71
VEGFA-206ENST00000372077 FAM107BQ9H098 131 aa19.49■□□□□ 0.71
VEGFA-206ENST00000372077 CWH43Q9H720 699 aa19.49■□□□□ 0.71
VEGFA-206ENST00000372077 EPB41L5Q9HCM4 733 aa19.49■□□□□ 0.71
VEGFA-206ENST00000372077 CHORDC1Q9UHD1 332 aaPredicted RBP19.49■□□□□ 0.71
VEGFA-206ENST00000372077 PCDHB8Q9UN66 801 aa19.49■□□□□ 0.71
VEGFA-206ENST00000372077 PRG3Q9Y2Y8 225 aaPredicted RBP19.49■□□□□ 0.71
VEGFA-206ENST00000372077 TIMM13Q9Y5L4 95 aaPredicted RBP19.49■□□□□ 0.71
VEGFA-206ENST00000372077 TMEM240Q5SV17 173 aa19.49■□□□□ 0.71
VEGFA-206ENST00000372077 ARHGAP17Q68EM7 881 aa19.49■□□□□ 0.71
VEGFA-206ENST00000372077 C12orf29Q8N999 325 aa19.49■□□□□ 0.71
VEGFA-206ENST00000372077 ZNF518BQ9C0D4 1074 aa19.49■□□□□ 0.71
VEGFA-206ENST00000372077 MARCH5Q9NX47 278 aa19.49■□□□□ 0.71
VEGFA-206ENST00000372077 TSC2P49815 1807 aa19.49■□□□□ 0.71
VEGFA-206ENST00000372077 NAA35Q5VZE5 725 aa19.48■□□□□ 0.71
VEGFA-206ENST00000372077 PPP1R2P3Q6NXS1 205 aa19.48■□□□□ 0.71
VEGFA-206ENST00000372077 C8orf74Q6P047 294 aa19.48■□□□□ 0.71
VEGFA-206ENST00000372077 LCLAT1Q6UWP7 414 aa19.48■□□□□ 0.71
VEGFA-206ENST00000372077 PASD1Q8IV76 773 aa19.48■□□□□ 0.71
VEGFA-206ENST00000372077 WDTC1Q8N5D0 677 aa19.48■□□□□ 0.71
VEGFA-206ENST00000372077 TNIP3Q96KP6 325 aa19.48■□□□□ 0.71
VEGFA-206ENST00000372077 ALS2CR12Q96Q35 445 aa19.48■□□□□ 0.71
VEGFA-206ENST00000372077 DDX43Q9NXZ2 648 aaKnown RBP19.48■□□□□ 0.71
VEGFA-206ENST00000372077 DENND1BQ6P3S1 775 aa19.48■□□□□ 0.71
VEGFA-206ENST00000372077 GOLGA6CA6NDK9 693 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 TADA2AO75478 443 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 MICAL2O94851 1124 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 GOLGA6DP0CG33 693 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 TUBB2AQ13885 445 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 PSRC1Q6PGN9 363 aaPredicted RBP19.47■□□□□ 0.71
VEGFA-206ENST00000372077 TMCO2Q7Z6W1 182 aaPredicted RBP19.47■□□□□ 0.71
VEGFA-206ENST00000372077 METTL23Q86XA0 190 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 TMEM35BQ8NCS4 154 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 CPA5Q8WXQ8 436 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 RTP3Q9BQQ7 232 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 TUBB2BQ9BVA1 445 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 GOLGA6AQ9NYA3 693 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 ADAM28Q9UKQ2 775 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 PTPRSQ13332 1948 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 MKI67P46013 3256 aaKnown RBP19.47■□□□□ 0.71
VEGFA-206ENST00000372077 TRAPPC3O43617 180 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 SYN1P17600 705 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 BCAR1P56945 870 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 PPP1R26Q5T8A7 1209 aaPredicted RBP19.47■□□□□ 0.71
VEGFA-206ENST00000372077 KIAA0319Q5VV43 1072 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 PHF13Q86YI8 300 aaPredicted RBP19.47■□□□□ 0.71
VEGFA-206ENST00000372077 CMTR2Q8IYT2 770 aaKnown RBP19.47■□□□□ 0.71
VEGFA-206ENST00000372077 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.47■□□□□ 0.711e-12■■■□□ 14.7
VEGFA-206ENST00000372077 A0A0A6YYK5 440 aaPredicted RBP19.47■□□□□ 0.71
VEGFA-206ENST00000372077 CCT5P48643 541 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 B3GALNT2Q8NCR0 500 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 LPIN3Q9BQK8 851 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 THAP2Q9H0W7 228 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 TSPAN16Q9UKR8 245 aa19.47■□□□□ 0.71
VEGFA-206ENST00000372077 PTPN1P18031 435 aaKnown RBP19.46■□□□□ 0.71
VEGFA-206ENST00000372077 PAFAH1B1P43034 410 aa19.46■□□□□ 0.71
VEGFA-206ENST00000372077 MAP9Q49MG5 647 aa19.46■□□□□ 0.71
VEGFA-206ENST00000372077 PKDCCQ504Y2 493 aa19.46■□□□□ 0.71
VEGFA-206ENST00000372077 MCOLN2Q8IZK6 566 aa19.46■□□□□ 0.71
VEGFA-206ENST00000372077 RNF10Q8N5U6 811 aaKnown RBP19.46■□□□□ 0.71
VEGFA-206ENST00000372077 OR2W6PQ8NHA6 318 aa19.46■□□□□ 0.71
VEGFA-206ENST00000372077 CTNNBL1Q8WYA6 563 aaPredicted RBP19.46■□□□□ 0.71
VEGFA-206ENST00000372077 VCPIP1Q96JH7 1222 aa19.46■□□□□ 0.71
VEGFA-206ENST00000372077 NOX5Q96PH1 765 aa19.46■□□□□ 0.71
VEGFA-206ENST00000372077 TRIM31Q9BZY9 425 aa19.46■□□□□ 0.71
VEGFA-206ENST00000372077 CDH9Q9ULB4 789 aa19.46■□□□□ 0.71
VEGFA-206ENST00000372077 NCANO14594 1321 aa19.46■□□□□ 0.71
VEGFA-206ENST00000372077 ABCB4P21439 1286 aa19.46■□□□□ 0.71
VEGFA-206ENST00000372077 NSFP46459 744 aaKnown RBP19.46■□□□□ 0.71
VEGFA-206ENST00000372077 GPC5P78333 572 aa19.46■□□□□ 0.71
VEGFA-206ENST00000372077 TCEAL1Q15170 157 aa19.46■□□□□ 0.71
VEGFA-206ENST00000372077 MON1BQ7L1V2 547 aa19.46■□□□□ 0.71
VEGFA-206ENST00000372077 HERVK_113Q902F9 699 aa19.46■□□□□ 0.71
VEGFA-206ENST00000372077 ZMYND8Q9ULU4 1186 aaPredicted RBP19.46■□□□□ 0.71
VEGFA-206ENST00000372077 CEP83Q9Y592 693 aa19.46■□□□□ 0.71
VEGFA-206ENST00000372077 KCNK3O14649 394 aa19.45■□□□□ 0.7
VEGFA-206ENST00000372077 SYN3O14994 580 aa19.45■□□□□ 0.7
VEGFA-206ENST00000372077 ATP2C2O75185 946 aa19.45■□□□□ 0.7
VEGFA-206ENST00000372077 HEXIM1O94992 359 aaKnown RBP19.45■□□□□ 0.7
VEGFA-206ENST00000372077 ACAT1P24752 427 aaKnown RBP19.45■□□□□ 0.7
VEGFA-206ENST00000372077 GPD2P43304 727 aa19.45■□□□□ 0.7
VEGFA-206ENST00000372077 PTP4A2Q12974 167 aa19.45■□□□□ 0.7
VEGFA-206ENST00000372077 PDCLQ13371 301 aa19.45■□□□□ 0.7
VEGFA-206ENST00000372077 FAM117BQ6P1L5 589 aa19.45■□□□□ 0.7
VEGFA-206ENST00000372077 C1orf131Q8NDD1 294 aaKnown RBP19.45■□□□□ 0.7
VEGFA-206ENST00000372077 ARHGEF26Q96DR7 871 aa19.45■□□□□ 0.7
VEGFA-206ENST00000372077 SYT15Q9BQS2 421 aa19.45■□□□□ 0.7
VEGFA-206ENST00000372077 ACBD6Q9BR61 282 aa19.45■□□□□ 0.7
VEGFA-206ENST00000372077 RASSF4Q9H2L5 321 aa19.45■□□□□ 0.7
VEGFA-206ENST00000372077 ACBD3Q9H3P7 528 aa19.45■□□□□ 0.7
VEGFA-206ENST00000372077 FAM49BQ9NUQ9 324 aa19.45■□□□□ 0.7
VEGFA-206ENST00000372077 PCSK1P29120 753 aa19.45■□□□□ 0.7
VEGFA-206ENST00000372077 OVOS1Q6IE37 1185 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms