RNA–Protein interactions for RNA: ENST00000372044.7

CCDC17-201, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,873 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-201ENST00000372044 TBKBP1A7MCY6 615 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 EFCAB8A8MWE9 144 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 TIMP1P01033 207 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 CTAGE8P0CG41 777 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 TCF4P15884 667 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 PEX5P50542 639 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 C2orf54Q08AI8 447 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 BST2Q10589 180 aaKnown RBP19.2■□□□□ 0.66
CCDC17-201ENST00000372044 CTAGE6Q86UF2 777 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 CTAGE4Q8IX94 777 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 PCED1BQ96HM7 432 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 FAM193BQ96PV7 902 aaPredicted RBP19.2■□□□□ 0.66
CCDC17-201ENST00000372044 HNRNPABQ99729 332 aaKnown RBP19.2■□□□□ 0.66
CCDC17-201ENST00000372044 RHOBTB2Q9BYZ6 727 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 TMEM189-UBE2V1I3L0A0 370 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 NRP1O14786 923 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 CEP104O60308 925 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 CACNA2D1P54289 1103 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 BCAT1P54687 386 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 TAS2R40P59535 323 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 ZNF268Q14587 947 aaPredicted RBP19.2■□□□□ 0.66
CCDC17-201ENST00000372044 TRNP1Q6NT89 227 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 DCUN1D2Q6PH85 259 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 CLEC4CQ8WTT0 213 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 SELENOOQ9BVL4 669 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 TMLHEQ9NVH6 421 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 MARCH5Q9NX47 278 aa19.2■□□□□ 0.66
CCDC17-201ENST00000372044 SIGLEC16A6NMB1 481 aa19.19■□□□□ 0.66
CCDC17-201ENST00000372044 NT5C1B-RDH14C9J2C7 533 aa19.19■□□□□ 0.66
CCDC17-201ENST00000372044 KRT3P12035 628 aa19.19■□□□□ 0.66
CCDC17-201ENST00000372044 CTNNA1P35221 906 aaKnown RBP19.19■□□□□ 0.66
CCDC17-201ENST00000372044 SLC11A1P49279 550 aa19.19■□□□□ 0.66
CCDC17-201ENST00000372044 IKBKEQ14164 716 aa19.19■□□□□ 0.66
CCDC17-201ENST00000372044 TAF5Q15542 800 aa19.19■□□□□ 0.66
CCDC17-201ENST00000372044 TMEM110Q86TL2 294 aa19.19■□□□□ 0.66
CCDC17-201ENST00000372044 LRRTM3Q86VH5 581 aa19.19■□□□□ 0.66
CCDC17-201ENST00000372044 TMEM173Q86WV6 379 aaPredicted RBP19.19■□□□□ 0.66
CCDC17-201ENST00000372044 SCUBE3Q8IX30 993 aa19.19■□□□□ 0.66
CCDC17-201ENST00000372044 CDH9Q9ULB4 789 aa19.19■□□□□ 0.66
CCDC17-201ENST00000372044 USTQ9Y2C2 406 aa19.19■□□□□ 0.66
CCDC17-201ENST00000372044 F8VP50 259 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 KIAA0355O15063 1070 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 PAPSS1O43252 624 aaPredicted RBP19.18■□□□□ 0.66
CCDC17-201ENST00000372044 GRAP2O75791 330 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 SETSIPP0DME0 302 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 DEFB103AP81534 67 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 CKAP4Q07065 602 aaKnown RBP19.18■□□□□ 0.66
CCDC17-201ENST00000372044 FAM102AQ5T9C2 384 aaPredicted RBP19.18■□□□□ 0.66
CCDC17-201ENST00000372044 CCDC181Q5TID7 509 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 OVOS1Q6IE37 1185 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 OR6B2Q6IFH4 312 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 CLEC20AQ6ZU45 233 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 ZNF572Q7Z3I7 529 aaPredicted RBP19.18■□□□□ 0.66
CCDC17-201ENST00000372044 UBE2Q1Q7Z7E8 422 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 IPO4Q8TEX9 1081 aaKnown RBP19.18■□□□□ 0.66
CCDC17-201ENST00000372044 PBKQ96KB5 322 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 PKMYT1Q99640 499 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 DUSP16Q9BY84 665 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 KRT82Q9NSB4 513 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 PCDHA3Q9Y5H8 950 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 GREB1Q4ZG55 1949 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 MIF4GDA9UHW6 222 aaKnown RBP19.18■□□□□ 0.66
CCDC17-201ENST00000372044 CES2O00748 559 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 ACRP10323 421 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 CTNNA2P26232 953 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 OLFML1Q6UWY5 402 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 RASGEF1CQ8N431 466 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 MSANTD4Q8NCY6 345 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 SPATA4Q8NEY3 305 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 MYCBPAPQ8TBZ2 947 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 GOLGA1Q92805 767 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 KHSRPQ92945 711 aaKnown RBP eCLIP19.18■□□□□ 0.66
CCDC17-201ENST00000372044 B3GALT6Q96L58 329 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 MED10Q9BTT4 135 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 GPR62Q9BZJ7 368 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 MIS12Q9H081 205 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 RNF216Q9NWF9 866 aaPredicted RBP19.18■□□□□ 0.66
CCDC17-201ENST00000372044 WDR35Q9P2L0 1181 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 PCDHB8Q9UN66 801 aa19.18■□□□□ 0.66
CCDC17-201ENST00000372044 RAG1P15918 1043 aa19.17■□□□□ 0.66
CCDC17-201ENST00000372044 NPR3P17342 541 aa19.17■□□□□ 0.66
CCDC17-201ENST00000372044 RPL34P49207 117 aaKnown RBP19.17■□□□□ 0.66
CCDC17-201ENST00000372044 PLCB3Q01970 1234 aa19.17■□□□□ 0.66
CCDC17-201ENST00000372044 CFAP221Q4G0U5 840 aa19.17■□□□□ 0.66
CCDC17-201ENST00000372044 INTS6LQ5JSJ4 861 aaKnown RBP19.17■□□□□ 0.66
CCDC17-201ENST00000372044 FAM35AQ86V20 835 aa19.17■□□□□ 0.66
CCDC17-201ENST00000372044 PIGZQ86VD9 579 aa19.17■□□□□ 0.66
CCDC17-201ENST00000372044 METTL23Q86XA0 190 aa19.17■□□□□ 0.66
CCDC17-201ENST00000372044 ARFGAP1Q8N6T3 406 aa19.17■□□□□ 0.66
CCDC17-201ENST00000372044 ZMIZ2Q8NF64 920 aa19.17■□□□□ 0.66
CCDC17-201ENST00000372044 BCL7CQ8WUZ0 217 aaPredicted RBP19.17■□□□□ 0.66
CCDC17-201ENST00000372044 UBXN4Q92575 508 aa19.17■□□□□ 0.66
CCDC17-201ENST00000372044 MYLPFQ96A32 169 aa19.17■□□□□ 0.66
CCDC17-201ENST00000372044 ACBD6Q9BR61 282 aa19.17■□□□□ 0.66
CCDC17-201ENST00000372044 RBM12Q9NTZ6 932 aaKnown RBP19.17■□□□□ 0.66
CCDC17-201ENST00000372044 IP6K2Q9UHH9 426 aa19.17■□□□□ 0.66
CCDC17-201ENST00000372044 TADA2AO75478 443 aa19.16■□□□□ 0.66
CCDC17-201ENST00000372044 OR4Q2P0C623 313 aa19.16■□□□□ 0.66
CCDC17-201ENST00000372044 PYGMP11217 842 aa19.16■□□□□ 0.66
CCDC17-201ENST00000372044 LCP1P13796 627 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms