RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 FBXO47Q5MNV8 452 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 WASHC2DQ5SRD0 308 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 PHLDB3Q6NSJ2 640 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 ADAT2Q7Z6V5 191 aaKnown RBP12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 ZDHHC14Q8IZN3 488 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 FITM2Q8N6M3 262 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 DEPTORQ8TB45 409 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 SPDL1Q96EA4 605 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 TGS1Q96RS0 853 aaKnown RBP12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 KIFC3Q9BVG8 833 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 TIPINQ9BVW5 301 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 TRAIPQ9BWF2 469 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 STRA6Q9BX79 667 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 AGO3Q9H9G7 860 aaKnown RBP12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 IFT122Q9HBG6 1241 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 AAASQ9NRG9 546 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 SPATS2LQ9NUQ6 558 aaKnown RBP12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 GTF3C4Q9UKN8 822 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 DCTN3O75935 186 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 GAS8O95995 478 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 PLS3P13797 630 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 DARSP14868 501 aaKnown RBP12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 BRAFP15056 766 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 GNAZP19086 355 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 IBSPP21815 317 aaPredicted RBP12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 CD52P31358 61 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 GCKP35557 465 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 MAGEA10P43363 369 aaPredicted RBP12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 PHKA2P46019 1235 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 PPARDQ03181 441 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 CENPCQ03188 943 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 DMP1Q13316 513 aaPredicted RBP12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 LONRF1Q17RB8 773 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 ODR4Q5SWX8 454 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 ZNF410Q86VK4 478 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 RPUSD2Q8IZ73 545 aaKnown RBP12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 ENDOVQ8N8Q3 282 aaKnown RBP12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 FAM81BQ96LP2 452 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 FIZ1Q96SL8 496 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 MINDY3Q9H8M7 445 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 KMT5AQ9NQR1 393 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 SEPT11Q9NVA2 429 aaKnown RBP12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 SENP1Q9P0U3 644 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 LARSQ9P2J5 1176 aaKnown RBP12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 USH1CQ9Y6N9 552 aa12.06□□□□□ -0.48
TSPAN1-201ENST00000372003 INO80B-WBP1J3KQ70 363 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 TRAFD1O14545 582 aaPredicted RBP12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 NDC80O14777 642 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 SLC16A4O15374 487 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 CALB2P22676 271 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 NAMPTP43490 491 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 NPTX2P47972 431 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 MRPS35P82673 323 aaKnown RBP12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 KRT17Q04695 432 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 PTP4A2Q12974 167 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 PPIGQ13427 754 aaKnown RBP eCLIP12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 MESDQ14696 234 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 LBRQ14739 615 aaKnown RBP12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 RASA2Q15283 850 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 EPC2Q52LR7 807 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 ERICH1Q86X53 443 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 FAM178BQ8IXR5 827 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 LMNTD2Q8IXW0 634 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 DBF4BQ8NFT6 615 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 FAM212AQ96EL1 285 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 NAF1Q96HR8 494 aaKnown RBP12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 SH3GL3Q99963 347 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 INO80BQ9C086 356 aaPredicted RBP12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 TMEM206Q9H813 350 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 RNPEPL1Q9HAU8 725 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 KCNK9Q9NPC2 374 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 EURLQ9NYK6 297 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 PADI3Q9ULW8 664 aa12.05□□□□□ -0.48
TSPAN1-201ENST00000372003 ANKRD63C9JTQ0 380 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 TP73O15350 636 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 SPOPO43791 374 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 AHCYL1O43865 530 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 PARNO95453 639 aaKnown RBP12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 TAC1P20366 129 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 IVDP26440 423 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 NMT1P30419 496 aaKnown RBP12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 ALDH3A1P30838 453 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 RFC2P35250 354 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 SLC1A1P43005 524 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 KCNA1Q09470 495 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 TAF11Q15544 211 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 ARHGAP44Q17R89 818 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 SGSM1Q2NKQ1 1148 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 AADACL2Q6P093 401 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 TSHZ1Q6ZSZ6 1077 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 C16orf59Q7L2K0 433 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 PALB2Q86YC2 1186 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 TDRPQ86YL5 185 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 ZBTB8OSQ8IWT0 167 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 FAM71AQ8IYT1 594 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 ZNF564Q8TBZ8 553 aaPredicted RBP12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 ZNF398Q8TD17 642 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 VWCEQ96DN2 955 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 PITPNM3Q9BZ71 974 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 C17orf75Q9HAS0 396 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms