RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 CEP19Q96LK0 163 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 PLA2G4CQ9UP65 541 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 PXDNLA1KZ92 1463 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 MAP3K15Q6ZN16 1313 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 CNTNAP5Q8WYK1 1306 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 GPR75-ASB3A0A0A6YYF3 556 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 GOLGA8TH3BQL2 631 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 STAM2O75886 525 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 HSPA8P11142 646 aaKnown RBP12.27□□□□□ -0.45
PTPN1-201ENST00000371621 CCNB1P14635 433 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 SNAP25P60880 206 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 RPL10AP62906 217 aaKnown RBP12.27□□□□□ -0.45
PTPN1-201ENST00000371621 ADRM1Q16186 407 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 DNAJC24Q6P3W2 148 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 MRPL47Q9HD33 250 aaKnown RBP12.27□□□□□ -0.45
PTPN1-201ENST00000371621 ASB3Q9Y575 518 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 GSTT2P0CG29 244 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 GSTT2BP0CG30 244 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 ETS1P14921 441 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 FDFT1P37268 417 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 CDO1Q16878 200 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 NOP9Q86U38 636 aaKnown RBP12.26□□□□□ -0.45
PTPN1-201ENST00000371621 SUN5Q8TC36 379 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 UTP4Q969X6 686 aaKnown RBP12.26□□□□□ -0.45
PTPN1-201ENST00000371621 OSBPL10Q9BXB5 764 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 MAN1C1Q9NR34 630 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 XPO7Q9UIA9 1087 aaKnown RBP12.26□□□□□ -0.45
PTPN1-201ENST00000371621 NCAPD2Q15021 1401 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 HTR3EA5X5Y0 456 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 TRIM16O95361 564 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 EIF3EP60228 445 aaKnown RBP12.26□□□□□ -0.45
PTPN1-201ENST00000371621 SMTNL2Q2TAL5 461 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 RALGPS1Q5JS13 557 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 FAM102BQ5T8I3 360 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 TTC27Q6P3X3 843 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 CCDC81Q6ZN84 652 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 NUP93Q8N1F7 819 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 CNDP1Q96KN2 507 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 NAP1L4Q99733 375 aaKnown RBP12.26□□□□□ -0.45
PTPN1-201ENST00000371621 MARCH7Q9H992 704 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 VPS51Q9UID3 782 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 GNEQ9Y223 722 aaKnown RBP12.26□□□□□ -0.45
PTPN1-201ENST00000371621 MAP2P11137 1827 aaKnown RBP12.26□□□□□ -0.45
PTPN1-201ENST00000371621 SPATA31D1Q6ZQQ2 1576 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 NOTOA8MTQ0 251 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 HNRNPCL2B2RXH8 293 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 TSC22D2O75157 780 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 CHEK2O96017 543 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 OGFOD2Q6N063 350 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 SMYD1Q8NB12 490 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 TMEM47Q9BQJ4 181 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 POLR3CQ9BUI4 534 aaPredicted RBP12.26□□□□□ -0.45
PTPN1-201ENST00000371621 POLR1BQ9H9Y6 1135 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 GTSE1Q9NYZ3 720 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 SEPT3Q9UH03 358 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 SLC7A8Q9UHI5 535 aa12.26□□□□□ -0.45
PTPN1-201ENST00000371621 KDM6AO15550 1401 aaPredicted RBP12.26□□□□□ -0.45
PTPN1-201ENST00000371621 KCNA4P22459 653 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 BRDTQ58F21 947 aaPredicted RBP12.25□□□□□ -0.45
PTPN1-201ENST00000371621 SYDE2Q5VT97 1194 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 TRABD2AQ86V40 505 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 MYO1HQ8N1T3 1032 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 HTRA1Q92743 480 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 HDAC11Q96DB2 347 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 PGBD4Q96DM1 585 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 BORCS6Q96GS4 357 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 HES6Q96HZ4 224 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 S100A14Q9HCY8 104 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 TLK1Q9UKI8 766 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 ESYT2A0FGR8 921 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 CES2O00748 559 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 DNALI1O14645 258 aaPredicted RBP12.25□□□□□ -0.45
PTPN1-201ENST00000371621 ASNA1O43681 348 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 KRT19P08727 400 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 TMEM191BP0C7N4 346 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 ALADP13716 330 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 SLC12A2P55011 1212 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 INHBCP55103 352 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 UBE3AQ05086 875 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 CCDC85BQ15834 202 aaPredicted RBP12.25□□□□□ -0.45
PTPN1-201ENST00000371621 TRIM60Q495X7 471 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 USP33Q8TEY7 942 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 REEP2Q9BRK0 252 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 DGCR6LQ9BY27 220 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 RABL2AQ9UBK7 228 aaPredicted RBP12.25□□□□□ -0.45
PTPN1-201ENST00000371621 SEMA3DO95025 777 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 SGPL1O95470 568 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 PENKP01210 267 aaPredicted RBP12.25□□□□□ -0.45
PTPN1-201ENST00000371621 CDH15P55291 814 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 SFT2D3Q587I9 215 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 ZBTB41Q5SVQ8 909 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 KCNK18Q7Z418 384 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 MICU2Q8IYU8 434 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 SCAIQ8N9R8 606 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 SCFD1Q8WVM8 642 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 JADE3Q92613 823 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 SLC7A6OSQ96CW6 309 aaPredicted RBP12.25□□□□□ -0.45
PTPN1-201ENST00000371621 DCUN1D1Q96GG9 259 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 CEP295NLQ96MC4 621 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 EHMT1Q9H9B1 1298 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms