RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 ATP2C2O75185 946 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 OLFM2O95897 454 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 BCKDHBP21953 392 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 ABCD1P33897 745 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 DDIT3P35638 169 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 PNPLA4P41247 253 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 TSPY1Q01534 308 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 NFE2Q16621 373 aaPredicted RBP11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 PMS2CLQ68D20 193 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 FAM171BQ6P995 826 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 ARL14EPQ8N8R7 260 aaPredicted RBP11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 C12orf50Q8NA57 414 aaPredicted RBP11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 GLIS3Q8NEA6 775 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 MRPS31Q92665 395 aaKnown RBP11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 CD101Q93033 1021 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 CBWD1Q9BRT8 395 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 FAM213AQ9BRX8 229 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 MTMR12Q9C0I1 747 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 LINC00597Q9H2U6 94 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 CRTAC1Q9NQ79 661 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 AGAP1Q9UPQ3 857 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 CLIC4Q9Y696 253 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 CELSR3Q9NYQ7 3312 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 BAHCC1Q9P281 2608 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 CEP192Q8TEP8 1941 aa11.86□□□□□ -0.51
EXOSC1-204ENST00000370902 LOC400499M0QZD8 3231 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 APBB3O95704 486 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 KRT18P05783 430 aaKnown RBP11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 KCNA4P22459 653 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 MAGEA11P43364 429 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 CACNA2D1P54289 1103 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 TFAMQ00059 246 aaKnown RBP11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 TAF12Q16514 161 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 FBXO43Q4G163 708 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 LMBRD2Q68DH5 695 aaPredicted RBP11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 PSAPL1Q6NUJ1 521 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 ADGRF2Q8IZF7 708 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 TMEM86AQ8N2M4 240 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 CPA6Q8N4T0 437 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 TOP6BLQ8N6T0 577 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 OR5B17Q8NGF7 314 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 SPATA18Q8TC71 538 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 SH3RF2Q8TEC5 729 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 USP33Q8TEY7 942 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 FUBP3Q96I24 572 aaKnown RBP eCLIP11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 EDEM2Q9BV94 578 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 TPSD1Q9BZJ3 242 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 PDE11AQ9HCR9 933 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 OLFML3Q9NRN5 406 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 DUS2Q9NX74 493 aaKnown RBP11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 RBAKQ9NYW8 714 aaPredicted RBP11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 TBC1D7Q9P0N9 293 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 ITGA11Q9UKX5 1188 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 ARHGAP26Q9UNA1 814 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 KIF3AQ9Y496 699 aa11.85□□□□□ -0.51
EXOSC1-204ENST00000370902 ADAMTS9Q9P2N4 1935 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 GOLGA8IPA6NC78 632 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 GOLGA8JA6NMD2 632 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 PATE3B3GLJ2 98 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 H3BQV1 296 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 CDX4O14627 284 aaPredicted RBP11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 BMP15O95972 392 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 TOP3BO95985 862 aaKnown RBP11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 CYP17A1P05093 508 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 CKMP06732 381 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 USP17L7P0C7H9 530 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 GARTP22102 1010 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 LMO2P25791 158 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 HOXD13P35453 343 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 PSMC1P62191 440 aaKnown RBP11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 RPL10AP62906 217 aaKnown RBP11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 RNF43Q68DV7 783 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 TMEM92Q6UXU6 159 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 BRAPQ7Z569 592 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 C12orf40Q86WS4 652 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 MDGA1Q8NFP4 955 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 OLIG1Q8TAK6 271 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 ATP2A3Q93084 1043 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 MYLPFQ96A32 169 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 CLIC6Q96NY7 704 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 TTLL2Q9BWV7 592 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 GZF1Q9H116 711 aaPredicted RBP11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 TRPC7Q9HCX4 862 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 UXTQ9UBK9 157 aaPredicted RBP11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 SEL1LQ9UBV2 794 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 STK17AQ9UEE5 414 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 SNX9Q9Y5X1 595 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 CACNA1EQ15878 2313 aa11.84□□□□□ -0.51
EXOSC1-204ENST00000370902 PI4KAP42356 2102 aa11.83□□□□□ -0.52
EXOSC1-204ENST00000370902 TRAV19A0A0A6YYK7 116 aa11.83□□□□□ -0.52
EXOSC1-204ENST00000370902 C1QTNF9BB2RNN3 333 aa11.83□□□□□ -0.52
EXOSC1-204ENST00000370902 C1QTNF9P0C862 333 aa11.83□□□□□ -0.52
EXOSC1-204ENST00000370902 IFNAR2P48551 515 aa11.83□□□□□ -0.52
EXOSC1-204ENST00000370902 MYL7Q01449 175 aa11.83□□□□□ -0.52
EXOSC1-204ENST00000370902 RESTQ13127 1097 aa11.83□□□□□ -0.52
EXOSC1-204ENST00000370902 POSTNQ15063 836 aa11.83□□□□□ -0.52
EXOSC1-204ENST00000370902 CC2D1AQ6P1N0 951 aaPredicted RBP11.83□□□□□ -0.52
EXOSC1-204ENST00000370902 FAM173BQ6P4H8 233 aa11.83□□□□□ -0.52
EXOSC1-204ENST00000370902 PHTF2Q8N3S3 785 aa11.83□□□□□ -0.52
EXOSC1-204ENST00000370902 KRI1Q8N9T8 703 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms