RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 ZNF180Q9UJW8 692 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 SIK3Q9Y2K2 1263 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 PCDHB2Q9Y5E7 798 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 TULP4Q9NRJ4 1543 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 KPNA4O00629 521 aaPredicted RBP13.19□□□□□ -0.3
GPC4-201ENST00000370828 MMP13P45452 471 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 RPL5P46777 297 aaKnown RBP13.19□□□□□ -0.3
GPC4-201ENST00000370828 SCNN1BP51168 640 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 CACNB3P54284 484 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 TAP1Q03518 808 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 SCRN3Q0VDG4 424 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 DMC1Q14565 340 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 TSC22D1Q15714 1073 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 PKN1Q16512 942 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 C6orf10Q5SRN2 563 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 OR6B3Q8NGW1 331 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 OR6Y1Q8NGX8 325 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 SGF29Q96ES7 293 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 PHACTR1Q9C0D0 580 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.19□□□□□ -0.3
GPC4-201ENST00000370828 SNTNA6NMZ2 147 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 PYGLP06737 847 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 ZCCHC7Q8N3Z6 543 aaKnown RBP13.18□□□□□ -0.3
GPC4-201ENST00000370828 OR9Q1Q8NGQ5 310 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 PAGR1Q9BTK6 254 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 LRRC4BQ9NT99 713 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 PAK5Q9P286 719 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 GRIN2DO15399 1336 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 ABLIM1O14639 778 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 MAP3K6O95382 1288 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 ZNF23P17027 643 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 HADHAP40939 763 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 TRAF2Q12933 501 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 SPDYCQ5MJ68 293 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 RIPOR1Q6ZS17 1223 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 FEZF2Q8TBJ5 459 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 GIPC3Q8TF64 312 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 SCFD1Q8WVM8 642 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 PIGBQ92521 554 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 INPP4AQ96PE3 977 aaPredicted RBP13.18□□□□□ -0.3
GPC4-201ENST00000370828 FSD1LQ9BXM9 530 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 ILKAPQ9H0C8 392 aaPredicted RBP13.18□□□□□ -0.3
GPC4-201ENST00000370828 MYRFQ9Y2G1 1151 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 NCAPD2Q15021 1401 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 SPDYE5A6NIY4 337 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 KIAA0391O15091 583 aaKnown RBP13.18□□□□□ -0.3
GPC4-201ENST00000370828 PSAPP07602 524 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 KRR1Q13601 381 aaKnown RBP13.18□□□□□ -0.3
GPC4-201ENST00000370828 MTMR1Q13613 665 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 PTK2BQ14289 1009 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 PIGHQ14442 188 aaPredicted RBP13.18□□□□□ -0.3
GPC4-201ENST00000370828 SURF1Q15526 300 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 C15orf59Q2T9L4 293 aaPredicted RBP13.18□□□□□ -0.3
GPC4-201ENST00000370828 RSBN1Q5VWQ0 802 aaPredicted RBP13.18□□□□□ -0.3
GPC4-201ENST00000370828 FAM160B1Q5W0V3 765 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 IQCF2Q8IXL9 164 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 KRT35Q92764 455 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 WNK4Q96J92 1243 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 BBS2Q9BXC9 721 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 RUBCNLQ9H714 662 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 EML4Q9HC35 981 aaKnown RBP13.18□□□□□ -0.3
GPC4-201ENST00000370828 GLI2P10070 1586 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 PBX1P40424 430 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 USP46P62068 366 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 UTS2BQ765I0 119 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 OR6P1Q8NGX9 317 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 AXIN2Q9Y2T1 843 aa13.18□□□□□ -0.3
GPC4-201ENST00000370828 CLRN2A0PK11 232 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 BAIAP3O94812 1187 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 FESP07332 822 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 ATP6V1E1P36543 226 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 MRPS22P82650 360 aaKnown RBP13.17□□□□□ -0.3
GPC4-201ENST00000370828 SLC25A3Q00325 362 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 FAPQ12884 760 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 MCPH1Q8NEM0 835 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 COG4Q9H9E3 785 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 PACSIN3Q9UKS6 424 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 CFAP99D6REC4 459 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 NUDT17P0C025 328 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 RRM1P23921 792 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 SPRP35270 261 aaPredicted RBP13.17□□□□□ -0.3
GPC4-201ENST00000370828 ACOT2P49753 483 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 NRF1Q16656 503 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 HDDC2Q7Z4H3 204 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 FITM2Q8N6M3 262 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 SNX2O60749 519 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 PDGFRAP16234 1089 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 KCNQ4P56696 695 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 STX5Q13190 355 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 PARP6Q2NL67 630 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 ZCCHC23Q6ZST2 131 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 NSUN4Q96CB9 384 aaKnown RBP13.17□□□□□ -0.3
GPC4-201ENST00000370828 CDHR1Q96JP9 859 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 AGPAT3Q9NRZ7 376 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 FAM217BQ9NTX9 383 aaPredicted RBP13.17□□□□□ -0.3
GPC4-201ENST00000370828 AGO2Q9UKV8 859 aaKnown RBP13.17□□□□□ -0.3
GPC4-201ENST00000370828 QRICH2Q9H0J4 1663 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 GH2P01242 217 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 PSMA4P25789 261 aaKnown RBP13.17□□□□□ -0.3
GPC4-201ENST00000370828 BNIP1Q12981 228 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms