RNA–Protein interactions for RNA: ENST00000370794.7

USP33-204, Transcript of ubiquitin specific peptidase 33, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP33, Length 4,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-204ENST00000370794 BDNFP23560 247 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 SLMAPQ14BN4 828 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 PLCD4Q9BRC7 762 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 SAYSD1Q9NPB0 183 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 IRAK4Q9NWZ3 460 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 GABRQQ9UN88 632 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 ESYT3A0FGR9 886 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 GRID2IPA4D2P6 1211 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 F5H5T6 163 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 TWF1Q12792 350 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 PDCLQ13371 301 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 GRB14Q14449 540 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 GKAP1Q5VSY0 366 aaPredicted RBP13.22□□□□□ -0.29
USP33-204ENST00000370794 SRLQ86TD4 932 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 FAM131BQ86XD5 332 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 TMEM86AQ8N2M4 240 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 GIPC2Q8TF65 315 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 SYN2Q92777 582 aaPredicted RBP13.22□□□□□ -0.29
USP33-204ENST00000370794 DUSP9Q99956 384 aaKnown RBP13.22□□□□□ -0.29
USP33-204ENST00000370794 ALG6Q9Y672 507 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 EXOC1LA0A1B0GW35 172 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 H3BQF6 201 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 GMNNO75496 209 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 COMTP21964 271 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 SMARCD1Q96GM5 515 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 PAWRQ96IZ0 340 aaKnown RBP13.22□□□□□ -0.29
USP33-204ENST00000370794 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.22□□□□□ -0.291e-6■■■□□ 17.7
USP33-204ENST00000370794 TLR8Q9NR97 1041 aaKnown RBP13.22□□□□□ -0.29
USP33-204ENST00000370794 NUP98P52948 1817 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 YWHAQP27348 245 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 TNFSF9P41273 254 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 MMGT1Q8N4V1 131 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 EDEM1Q92611 657 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 OSBPL8Q9BZF1 889 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 ZNF518BQ9C0D4 1074 aa13.22□□□□□ -0.29
USP33-204ENST00000370794 F8VZ95 297 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 KCNN4O15554 427 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 PAPOLAP51003 745 aaKnown RBP13.21□□□□□ -0.29
USP33-204ENST00000370794 SLC47A2Q86VL8 602 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 EFHBQ8N7U6 833 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 SCLYQ96I15 445 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 RILPQ96NA2 401 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 CIPCQ9C0C6 399 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 DHX33Q9H6R0 707 aaKnown RBP13.21□□□□□ -0.29
USP33-204ENST00000370794 DUSP10Q9Y6W6 482 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 CST8O60676 142 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 ACSL3O95573 720 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 ADH1AP07327 375 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 PLEKP08567 350 aaPredicted RBP13.21□□□□□ -0.29
USP33-204ENST00000370794 CYP2C18P33260 490 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 GCNT1Q02742 428 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 GRIK3Q13003 919 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 TUSC3Q13454 348 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 ECM1Q16610 540 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 USP41Q3LFD5 358 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 RAB44Q7Z6P3 723 aaPredicted RBP13.21□□□□□ -0.29
USP33-204ENST00000370794 HDAC11Q96DB2 347 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 C11orf49Q9H6J7 331 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 FAM8A1Q9UBU6 413 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 TBK1Q9UHD2 729 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 IPPQ9Y573 584 aa13.21□□□□□ -0.29
USP33-204ENST00000370794 C3orf70A6NLC5 250 aaPredicted RBP13.21□□□□□ -0.3
USP33-204ENST00000370794 ATP9BO43861 1147 aa13.21□□□□□ -0.3
USP33-204ENST00000370794 KRT14P02533 472 aa13.21□□□□□ -0.3
USP33-204ENST00000370794 MT-ND3P03897 115 aa13.21□□□□□ -0.3
USP33-204ENST00000370794 RRM1P23921 792 aa13.21□□□□□ -0.3
USP33-204ENST00000370794 CHRNA3P32297 505 aa13.21□□□□□ -0.3
USP33-204ENST00000370794 SLCO1A2P46721 670 aa13.21□□□□□ -0.3
USP33-204ENST00000370794 AMPD2Q01433 879 aa13.21□□□□□ -0.3
USP33-204ENST00000370794 CCDC137Q6PK04 289 aaKnown RBP13.21□□□□□ -0.3
USP33-204ENST00000370794 LRRC43Q8N309 656 aa13.21□□□□□ -0.3
USP33-204ENST00000370794 TTC30BQ8N4P2 665 aa13.21□□□□□ -0.3
USP33-204ENST00000370794 EMC1Q8N766 993 aa13.21□□□□□ -0.3
USP33-204ENST00000370794 ZNF784Q8NCA9 323 aaPredicted RBP13.21□□□□□ -0.3
USP33-204ENST00000370794 DEPDC1BQ8WUY9 529 aa13.21□□□□□ -0.3
USP33-204ENST00000370794 ALKBH8Q96BT7 664 aaKnown RBP13.21□□□□□ -0.3
USP33-204ENST00000370794 NIFKQ9BYG3 293 aaKnown RBP13.21□□□□□ -0.3
USP33-204ENST00000370794 THAP2Q9H0W7 228 aa13.21□□□□□ -0.3
USP33-204ENST00000370794 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.21□□□□□ -0.3
USP33-204ENST00000370794 ASMTLO95671 621 aa13.2□□□□□ -0.3
USP33-204ENST00000370794 GRM5P41594 1212 aa13.2□□□□□ -0.3
USP33-204ENST00000370794 CLK2P49760 499 aaKnown RBP13.2□□□□□ -0.3
USP33-204ENST00000370794 PPP3CAQ08209 521 aa13.2□□□□□ -0.3
USP33-204ENST00000370794 ADIGQ0VDE8 80 aa13.2□□□□□ -0.3
USP33-204ENST00000370794 IFT88Q13099 833 aa13.2□□□□□ -0.3
USP33-204ENST00000370794 SARS2Q9NP81 518 aaKnown RBP13.2□□□□□ -0.3
USP33-204ENST00000370794 PCDHB8Q9UN66 801 aa13.2□□□□□ -0.3
USP33-204ENST00000370794 MAFBQ9Y5Q3 323 aaPredicted RBP13.2□□□□□ -0.3
USP33-204ENST00000370794 ZNF536O15090 1300 aa13.2□□□□□ -0.3
USP33-204ENST00000370794 RBP3P10745 1247 aa13.2□□□□□ -0.3
USP33-204ENST00000370794 CCND3P30281 292 aaPredicted RBP13.2□□□□□ -0.3
USP33-204ENST00000370794 KPNA2P52292 529 aaKnown RBP13.2□□□□□ -0.3
USP33-204ENST00000370794 ARHGAP1Q07960 439 aa13.2□□□□□ -0.3
USP33-204ENST00000370794 OLFML2BQ68BL8 750 aa13.2□□□□□ -0.3
USP33-204ENST00000370794 UROC1Q96N76 676 aa13.2□□□□□ -0.3
USP33-204ENST00000370794 UNC93B1Q9H1C4 597 aa13.2□□□□□ -0.3
USP33-204ENST00000370794 GOLPH3Q9H4A6 298 aa13.2□□□□□ -0.3
USP33-204ENST00000370794 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.2□□□□□ -0.3
USP33-204ENST00000370794 PLAAQ9Y263 795 aa13.2□□□□□ -0.3
USP33-204ENST00000370794 C2CD2Q9Y426 696 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms