RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 TMEM176AQ96HP8 235 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 HEXIM2Q96MH2 286 aaKnown RBP15.75■□□□□ 0.11
COL9A1-204ENST00000370496 LSM14BQ9BX40 385 aaKnown RBP15.75■□□□□ 0.11
COL9A1-204ENST00000370496 HSD3B7Q9H2F3 369 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 UBE2TQ9NPD8 197 aaPredicted RBP15.75■□□□□ 0.11
COL9A1-204ENST00000370496 DMAP1Q9NPF5 467 aaPredicted RBP15.75■□□□□ 0.11
COL9A1-204ENST00000370496 LIMA1Q9UHB6 759 aaKnown RBP15.75■□□□□ 0.11
COL9A1-204ENST00000370496 MAGED2Q9UNF1 606 aaPredicted RBP15.75■□□□□ 0.11
COL9A1-204ENST00000370496 USTQ9Y2C2 406 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 NOTCH4Q99466 2003 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 OBSL1O75147 1896 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 F8VP50 259 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 GOLGA6L19H0YKK7 550 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 ZNF197O14709 1029 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 AP1G2O75843 785 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 FAM200BP0CF97 657 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 CSH1P0DML2 217 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 CSH2P0DML3 217 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 ATP1A3P13637 1013 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 KRT5P13647 590 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 CD19P15391 556 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 MFAP3P55082 362 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 APBA1Q02410 837 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 SLC5A9Q2M3M2 681 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 GJB7Q6PEY0 223 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 DNAJB7Q7Z6W7 309 aaPredicted RBP15.75■□□□□ 0.11
COL9A1-204ENST00000370496 LUZP1Q86V48 1076 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 TMC8Q8IU68 726 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 HS6ST3Q8IZP7 471 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 UBR7Q8N806 425 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 SLC4A11Q8NBS3 891 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 RBBP8NLQ8NC74 664 aaPredicted RBP15.75■□□□□ 0.11
COL9A1-204ENST00000370496 ITFG1Q8TB96 612 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 CYFIP2Q96F07 1278 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 KREMEN1Q96MU8 473 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 TSPY26PQ9H489 355 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 AVENQ9NQS1 362 aaPredicted RBP15.75■□□□□ 0.11
COL9A1-204ENST00000370496 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.75■□□□□ 0.11
COL9A1-204ENST00000370496 GREB1Q4ZG55 1949 aa15.74■□□□□ 0.11
COL9A1-204ENST00000370496 DOCK8Q8NF50 2099 aa15.74■□□□□ 0.11
COL9A1-204ENST00000370496 SLC38A8A6NNN8 435 aa15.74■□□□□ 0.11
COL9A1-204ENST00000370496 LGALS16A8MUM7 142 aa15.74■□□□□ 0.11
COL9A1-204ENST00000370496 FGF19O95750 216 aa15.74■□□□□ 0.11
COL9A1-204ENST00000370496 CEBPBP17676 345 aa15.74■□□□□ 0.11
COL9A1-204ENST00000370496 CACNA2D1P54289 1103 aa15.74■□□□□ 0.11
COL9A1-204ENST00000370496 EPHA5P54756 1037 aa15.74■□□□□ 0.11
COL9A1-204ENST00000370496 IQCB1Q15051 598 aa15.74■□□□□ 0.11
COL9A1-204ENST00000370496 ARHGAP44Q17R89 818 aa15.74■□□□□ 0.11
COL9A1-204ENST00000370496 SGO2Q562F6 1265 aa15.74■□□□□ 0.11
COL9A1-204ENST00000370496 C8orf48Q96LL4 319 aa15.74■□□□□ 0.11
COL9A1-204ENST00000370496 PCMTD1Q96MG8 357 aaPredicted RBP15.74■□□□□ 0.11
COL9A1-204ENST00000370496 MYADMQ96S97 322 aa15.74■□□□□ 0.11
COL9A1-204ENST00000370496 SLITRK6Q9H5Y7 841 aa15.74■□□□□ 0.11
COL9A1-204ENST00000370496 ZNF334Q9HCZ1 680 aaPredicted RBP15.74■□□□□ 0.11
COL9A1-204ENST00000370496 UXTQ9UBK9 157 aaPredicted RBP15.74■□□□□ 0.11
COL9A1-204ENST00000370496 A0A1W2PRU2 124 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 LOC730098B7Z3J9 87 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 NOL4O94818 638 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 ACO1P21399 889 aaKnown RBP15.73■□□□□ 0.11
COL9A1-204ENST00000370496 RFX1P22670 979 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 GABRR2P28476 465 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 CDC25CP30307 473 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 CCR2P41597 374 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 MAP3K7CLP57077 242 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 IFRD2Q12894 506 aaPredicted RBP15.73■□□□□ 0.11
COL9A1-204ENST00000370496 MTMR3Q13615 1198 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 GOLGA7BQ2TAP0 167 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 PRSS36Q5K4E3 855 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 LRSAM1Q6UWE0 723 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 DENND5BQ6ZUT9 1274 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 NPAS3Q8IXF0 933 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 GJD3Q8N144 294 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 FGF13Q92913 245 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 JAKMIP2Q96AA8 810 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 TCEAL4Q96EI5 215 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 SPATA17Q96L03 361 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 CEP295NLQ96MC4 621 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 HNRNPABQ99729 332 aaKnown RBP15.73■□□□□ 0.11
COL9A1-204ENST00000370496 SIX2Q9NPC8 291 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 TMEM30AQ9NV96 361 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 EHD2Q9NZN4 543 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 CDH7Q9ULB5 785 aa15.73■□□□□ 0.11
COL9A1-204ENST00000370496 C19orf67A6NJJ6 358 aa15.72■□□□□ 0.11
COL9A1-204ENST00000370496 PAEPP09466 180 aa15.72■□□□□ 0.11
COL9A1-204ENST00000370496 GJA1P17302 382 aa15.72■□□□□ 0.11
COL9A1-204ENST00000370496 USP8P40818 1118 aa15.72■□□□□ 0.11
COL9A1-204ENST00000370496 SLC8A3P57103 927 aa15.72■□□□□ 0.11
COL9A1-204ENST00000370496 UBXN1Q04323 297 aa15.72■□□□□ 0.11
COL9A1-204ENST00000370496 RAPGEF1Q13905 1077 aa15.72■□□□□ 0.11
COL9A1-204ENST00000370496 TEAD2Q15562 447 aa15.72■□□□□ 0.11
COL9A1-204ENST00000370496 FILIP1LQ4L180 1135 aa15.72■□□□□ 0.11
COL9A1-204ENST00000370496 ARHGAP15Q53QZ3 475 aa15.72■□□□□ 0.11
COL9A1-204ENST00000370496 PPP1R26Q5T8A7 1209 aaPredicted RBP15.72■□□□□ 0.11
COL9A1-204ENST00000370496 PAQR9Q6ZVX9 377 aa15.72■□□□□ 0.11
COL9A1-204ENST00000370496 PLCD3Q8N3E9 789 aa15.72■□□□□ 0.11
COL9A1-204ENST00000370496 SHKBP1Q8TBC3 707 aa15.72■□□□□ 0.11
COL9A1-204ENST00000370496 TRMT2BQ96GJ1 504 aaKnown RBP15.72■□□□□ 0.11
COL9A1-204ENST00000370496 ATXN3LQ9H3M9 355 aa15.72■□□□□ 0.11
COL9A1-204ENST00000370496 HESX1Q9UBX0 185 aa15.72■□□□□ 0.11
COL9A1-204ENST00000370496 DNAJC12Q9UKB3 198 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms