RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 ALDH1A1P00352 501 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 RARAP10276 462 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 DARSP14868 501 aaKnown RBP10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 ZNF211Q13398 564 aaPredicted RBP10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 ERMARDQ5T6L9 678 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 CWF19L1Q69YN2 538 aaKnown RBP10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 NOTUMQ6P988 496 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 ZNF449Q6P9G9 518 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 SLC27A1Q6PCB7 646 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 C7orf31Q8N865 590 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 PPP1R13LQ8WUF5 828 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 DNAJB3Q8WWF6 145 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 MRPL47Q9HD33 250 aaKnown RBP10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 METTL5Q9NRN9 209 aaKnown RBP10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 ANAPC7Q9UJX3 599 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 MGAMO43451 1857 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 DUSP11O75319 330 aaKnown RBP10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 RRM1P23921 792 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 CCND1P24385 295 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 ECHS1P30084 290 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 AXLP30530 894 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 PSMC4P43686 418 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 ASPAP45381 313 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 YARSP54577 528 aaKnown RBP10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 MON1BQ7L1V2 547 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 PHF13Q86YI8 300 aaPredicted RBP10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 TAB3Q8N5C8 712 aaPredicted RBP10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 EPS8L3Q8TE67 593 aaKnown RBP10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 ZSWIM1Q9BR11 485 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 C11orf70Q9BRQ4 267 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 PLEKHA5Q9HAU0 1116 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 ITGA11Q9UKX5 1188 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 PTPN22Q9Y2R2 807 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 SNX24Q9Y343 169 aa10.51□□□□□ -0.73
PRPF38B-203ENST00000370025 CITO14578 2027 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 TMEM88BA6NKF7 163 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 LSM8O95777 96 aaKnown RBP10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 IGHA2P01877 340 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 FGGP02679 453 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 C6orf222P0C671 652 aaPredicted RBP10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 EIF4BP23588 611 aaKnown RBP10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 RBP5P82980 135 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 C1QBPQ07021 282 aaKnown RBP10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 CAPN12Q6ZSI9 719 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 TMEM35BQ8NCS4 154 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 SMC1BQ8NDV3 1235 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 UCMAQ8WVF2 138 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 KIF12Q96FN5 646 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 HHIPL1Q96JK4 782 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 BTBD6Q96KE9 485 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 SPC25Q9HBM1 224 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 HOMER3Q9NSC5 361 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 POLIQ9UNA4 740 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 SLC12A4Q9UP95 1085 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 SCINQ9Y6U3 715 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 TREHO43280 583 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 CREB1P16220 341 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 SSTR3P32745 418 aaPredicted RBP10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 ADAM17P78536 824 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 PPP2R5EQ16537 467 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 SEL1L2Q5TEA6 688 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 ANO7Q6IWH7 933 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 NME8Q8N427 588 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 FBF1Q8TES7 1133 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 ZNF518BQ9C0D4 1074 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 CYP3A43Q9HB55 503 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 CDHR5Q9HBB8 845 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 GPBP1L1Q9HC44 474 aaPredicted RBP10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 DPP3Q9NY33 737 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 RPS6KL1Q9Y6S9 549 aa10.5□□□□□ -0.73
PRPF38B-203ENST00000370025 MED7O43513 233 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 CFHP08603 1231 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 CD19P15391 556 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 POLR2BP30876 1174 aaKnown RBP10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 HOXA11P31270 313 aaPredicted RBP10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 PURAQ00577 322 aaKnown RBP10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 LRRC23Q53EV4 343 aaPredicted RBP10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 LMNTD2Q8IXW0 634 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 MREGQ8N565 214 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 ALG3Q92685 438 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 HPDLQ96IR7 371 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 DDX50Q9BQ39 737 aaKnown RBP10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 PLVAPQ9BX97 442 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 BCO2Q9BYV7 579 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 VRTNQ9H8Y1 702 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 NR2E1Q9Y466 385 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 C5orf60A6NFR6 353 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 ECEL1O95672 775 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 CALB1P05937 261 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 GHRP10912 638 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 CTNNA2P26232 953 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 CTGFP29279 349 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 SLC1A1P43005 524 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 SLC29A2Q14542 456 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 MUM1Q2TAK8 710 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 GNASQ5JWF2 1037 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 RFX8Q6ZV50 586 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 TMC3Q7Z5M5 1100 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 CCHCR1Q8TD31 782 aa10.49□□□□□ -0.73
PRPF38B-203ENST00000370025 ZIC5Q96T25 663 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms