RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 ADNPQ9H2P0 1102 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 TUT1Q9H6E5 874 aaKnown RBP13.41□□□□□ -0.26
PTPRK-207ENST00000368226 PCDHAC2Q9Y5I4 1007 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 LMTK2Q8IWU2 1503 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 A0A1W2PQJ5 194 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 TSPAN3O60637 253 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 CYP11B1P15538 503 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 ADORA2AP29274 412 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 EARS2Q5JPH6 523 aaKnown RBP13.41□□□□□ -0.26
PTPRK-207ENST00000368226 TTC39BQ5VTQ0 682 aaPredicted RBP13.41□□□□□ -0.26
PTPRK-207ENST00000368226 RPAINQ86UA6 219 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 ARMC2Q8NEN0 867 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 MTBPQ96DY7 904 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 PDCD2LQ9BRP1 358 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 C17orf80Q9BSJ5 609 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 URODP06132 367 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 NME5P56597 212 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 DGKZQ13574 1117 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 TBC1D19Q8N5T2 526 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 ANKS1AQ92625 1134 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 SMAD5Q99717 465 aaKnown RBP13.41□□□□□ -0.26
PTPRK-207ENST00000368226 SCUBE2Q9NQ36 999 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 STX7O15400 261 aaKnown RBP13.4□□□□□ -0.26
PTPRK-207ENST00000368226 AGTP01019 485 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 SPRP35270 261 aaPredicted RBP13.4□□□□□ -0.26
PTPRK-207ENST00000368226 GLRBP48167 497 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 MDM1Q8TC05 714 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 PIH1D1Q9NWS0 290 aaKnown RBP13.4□□□□□ -0.26
PTPRK-207ENST00000368226 HEATR9A2RTY3 570 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 GTPBP10A4D1E9 387 aaKnown RBP13.4□□□□□ -0.26
PTPRK-207ENST00000368226 FKBP9O95302 570 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 MDH1P40925 334 aaKnown RBP13.4□□□□□ -0.26
PTPRK-207ENST00000368226 FKBP9P1Q75LS8 142 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 ZNF677Q86XU0 584 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 TRIM48Q8IWZ4 208 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 GMCL1Q96IK5 515 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 CIPCQ9C0C6 399 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 OSGEPQ9NPF4 335 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 TMEM120BA0PK00 339 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 MYO1CO00159 1063 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 VWA5AO00534 786 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 AKAP10O43572 662 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 SLURP2P0DP57 97 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 PLA2G4AP47712 749 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 GCLCP48506 637 aaPredicted RBP13.4□□□□□ -0.26
PTPRK-207ENST00000368226 LONP2Q86WA8 852 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 TATDN2Q93075 761 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 PDLIM2Q96JY6 352 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 CDYLQ9Y232 598 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 LOC100653049A0A140TA62 436 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 KRT34O76011 436 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 PYGLP06737 847 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 IL1R1P14778 569 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 TGM2P21980 687 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 OVGP1Q12889 678 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 DMC1Q14565 340 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 AARS2Q5JTZ9 985 aaKnown RBP13.4□□□□□ -0.26
PTPRK-207ENST00000368226 ARMC6Q6NXE6 501 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 TMC7Q7Z402 723 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 PPIL6Q8IXY8 311 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 CELF6Q96J87 481 aaKnown RBP13.4□□□□□ -0.26
PTPRK-207ENST00000368226 CGRRF1Q99675 332 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 IGFLR1Q9H665 355 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 H7C4K7 107 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 CBX4O00257 560 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 SLC26A4O43511 780 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 SRP72O76094 671 aaKnown RBP13.4□□□□□ -0.26
PTPRK-207ENST00000368226 DSG3P32926 999 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 ADCYAP1R1P41586 468 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 SLC29A2Q14542 456 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 SEC23AQ15436 765 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 MAPRE2Q15555 327 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 Q4G0T1 1027 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 RABGAP1LQ5R372 815 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 ZSWIM2Q8NEG5 633 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 ZIM3Q96PE6 472 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 PURBQ96QR8 312 aaKnown RBP13.4□□□□□ -0.26
PTPRK-207ENST00000368226 MRPL40Q9NQ50 206 aaKnown RBP13.4□□□□□ -0.26
PTPRK-207ENST00000368226 CHST12Q9NRB3 414 aa13.4□□□□□ -0.26
PTPRK-207ENST00000368226 DDX43Q9NXZ2 648 aaKnown RBP13.4□□□□□ -0.26
PTPRK-207ENST00000368226 LZTS3O60299 673 aaPredicted RBP13.39□□□□□ -0.27
PTPRK-207ENST00000368226 SKAP2O75563 359 aaPredicted RBP13.39□□□□□ -0.27
PTPRK-207ENST00000368226 UGP2Q16851 508 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 FUT11Q495W5 492 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 CCNI2Q6ZMN8 369 aaPredicted RBP13.39□□□□□ -0.27
PTPRK-207ENST00000368226 MRPS31Q92665 395 aaKnown RBP13.39□□□□□ -0.27
PTPRK-207ENST00000368226 SMPD4Q9NXE4 827 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 VPS28Q9UK41 221 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 NRXN1Q9ULB1 1477 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 FAM86B1E9PN63 330 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 P4HA2O15460 535 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 FAM86B2P0C5J1 330 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 IL10P22301 178 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 PMS1P54277 932 aaKnown RBP13.39□□□□□ -0.27
PTPRK-207ENST00000368226 CYP24A1Q07973 514 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 PKN1Q16512 942 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 ARHGAP18Q8N392 663 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 ADAM32Q8TC27 787 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 STAMBPL1Q96FJ0 436 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 WWOXQ9NZC7 414 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms