RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 CNOT8Q9UFF9 292 aaKnown RBP3.9□□□□□ -1.78
SYNE1-207ENST00000367255 C15orf41Q9Y2V0 281 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 ADCY9O60503 1353 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 LMTK3Q96Q04 1460 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 TTLL8A6PVC2 850 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 ERVV-1B6SEH8 477 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 SCGNO76038 276 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 TATP17735 454 aaPredicted RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 TAF2Q6P1X5 1199 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 MCPH1Q8NEM0 835 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 EBF2Q9HAK2 575 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 ADAM28Q9UKQ2 775 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 DRG1Q9Y295 367 aaKnown RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 PPIBP23284 216 aaKnown RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 PUDPQ08623 228 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 ATP1A4Q13733 1029 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 RERGLQ9H628 205 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 F5H423 210 aaPredicted RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 BUB1O43683 1085 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 CEBPAP49715 358 aaPredicted RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 ELP2Q6IA86 826 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 CYP4F22Q6NT55 531 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 ZNF530Q6P9A1 599 aaPredicted RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 SYTL5Q8TDW5 730 aaPredicted RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 SLC25A23Q9BV35 468 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 ABHD10Q9NUJ1 306 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 TJP2Q9UDY2 1190 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 CLIC4Q9Y696 253 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 FAUP35544 74 aaKnown RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 MRPS15P82914 257 aaKnown RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 ECT2LQ008S8 904 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 KHDRBS2Q5VWX1 349 aaKnown RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 ANKRD13BQ86YJ7 626 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 TOR1AIP2Q8NFQ8 470 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 SEPT5Q99719 369 aaPredicted RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 PPP3CCP48454 512 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 TBRG1Q3YBR2 411 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 BRSK2Q8IWQ3 736 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 SLC5A4Q9NY91 659 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 PCDHGB6Q9Y5F9 930 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 EXOC1LA0A1B0GW35 172 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 PRMT3O60678 531 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 ATP6V1E1P36543 226 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 MSH2P43246 934 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 CHN2P52757 468 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 MFAP3P55082 362 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 C1orf228Q6PIY5 440 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 METTL2AQ96IZ6 378 aaKnown RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 FAM20AQ96MK3 541 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 PHF20Q9BVI0 1012 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 CCNT2O60583 730 aaKnown RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 CCNFP41002 786 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 MPP3Q13368 585 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 PTGISQ16647 500 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 EID3Q8N140 333 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 ZC3H12CQ9C0D7 883 aaKnown RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 SLC6A16Q9GZN6 736 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 CDH19Q9H159 772 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 TRAF5O00463 557 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 A1BGP04217 495 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 FECHP22830 423 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 SLC9A3P48764 834 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 CYP4F2P78329 520 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 CYP4F3Q08477 520 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 PIGHQ14442 188 aaPredicted RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 SLC18A3Q16572 532 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 ZSWIM7Q19AV6 140 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 ZDHHC17Q8IUH5 632 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 RCOR2Q8IZ40 523 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 LINC00471Q8N535 108 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 PIGOQ8TEQ8 1089 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 MBD4O95243 580 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 PLEKHA8P1O95397 391 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 MT-ND3P03897 115 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 NUDT1P36639 197 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 AP1S2P56377 157 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 LRRC41Q15345 812 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 HYAL4Q2M3T9 481 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 RTL3Q8N8U3 475 aaKnown RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 B4GALNT2Q8NHY0 566 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 EME1Q96AY2 570 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 APOPT1Q96IL0 206 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 TRIM54Q9BYV2 358 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 USE1Q9NZ43 259 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 TSPAN9O75954 239 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 MAP4P27816 1152 aaKnown RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 PRKAR1BP31321 381 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 SERPINB6P35237 376 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 ZNF33AQ06730 810 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 PPIDQ08752 370 aaKnown RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 B3GNT6Q6ZMB0 384 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 CYB5R4Q7L1T6 521 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 KAZALD1Q96I82 304 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 FAM172BPA6NC97 362 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 OXCT1P55809 520 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 RTP1P59025 263 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 ERICH5Q6P6B1 374 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 RFWD2Q8NHY2 731 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 FIG4Q92562 907 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 MAT2BQ9NZL9 334 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms