RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 GLIS3Q8NEA6 775 aa12.54□□□□□ -0.4
MRPL55-213ENST00000366740 HPS3Q969F9 1004 aa12.54□□□□□ -0.4
MRPL55-213ENST00000366740 ACDQ96AP0 544 aa12.54□□□□□ -0.4
MRPL55-213ENST00000366740 TRMT2BQ96GJ1 504 aaKnown RBP12.54□□□□□ -0.4
MRPL55-213ENST00000366740 P2RY13Q9BPV8 354 aa12.54□□□□□ -0.4
MRPL55-213ENST00000366740 TMEM121BQ9BXQ6 578 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-213ENST00000366740 TRIM9Q9C026 710 aa12.54□□□□□ -0.4
MRPL55-213ENST00000366740 MRPL44Q9H9J2 332 aaKnown RBP12.54□□□□□ -0.4
MRPL55-213ENST00000366740 TMLHEQ9NVH6 421 aa12.54□□□□□ -0.4
MRPL55-213ENST00000366740 DPP3Q9NY33 737 aa12.54□□□□□ -0.4
MRPL55-213ENST00000366740 PCDHB5Q9Y5E4 795 aa12.54□□□□□ -0.4
MRPL55-213ENST00000366740 PLXNB3Q9ULL4 1909 aa12.54□□□□□ -0.4
MRPL55-213ENST00000366740 GON4LQ3T8J9 2241 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 LNP1A1A4G5 178 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 KPNA7A9QM74 516 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 NOL4O94818 638 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 RHOBTB1O94844 696 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 APBB3O95704 486 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 GAP43P17677 238 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 ADSSP30520 456 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 GPR15P49685 360 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 ACOT2P49753 483 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 NOVA1P51513 510 aaKnown RBP12.53□□□□□ -0.4
MRPL55-213ENST00000366740 FAM160A1Q05DH4 1040 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 BECN1Q14457 450 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 DMC1Q14565 340 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 MTF1Q14872 753 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 NFE2Q16621 373 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-213ENST00000366740 SV2CQ496J9 727 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 ADALQ6DHV7 355 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 CC2D1AQ6P1N0 951 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-213ENST00000366740 UNQ6494/PRO21346Q6UXR6 183 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 NT5DC4Q86YG4 428 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 EFCAB13Q8IY85 973 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 STKLD1Q8NE28 680 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 ZSWIM2Q8NEG5 633 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 OSCP1Q8WVF1 389 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 MRPS31Q92665 395 aaKnown RBP12.53□□□□□ -0.4
MRPL55-213ENST00000366740 CD101Q93033 1021 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 EXOC4Q96A65 974 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 SPATA32Q96LK8 384 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 MYRFLQ96LU7 910 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 ZNF560Q96MR9 790 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 TNMDQ9H2S6 317 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 CUEDC2Q9H467 287 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 TMEM206Q9H813 350 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 ECT2Q9H8V3 914 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 OLFML3Q9NRN5 406 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 SEL1LQ9UBV2 794 aa12.53□□□□□ -0.4
MRPL55-213ENST00000366740 A0A1B0GVL5 298 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 C4orf47A7E2U8 309 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 C1QTNF9BB2RNN3 333 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 DCLK1O15075 740 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 PRPF6O94906 941 aaKnown RBP12.52□□□□□ -0.41
MRPL55-213ENST00000366740 CAVIN2O95810 425 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 C1QTNF9P0C862 333 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 TCF3P15923 654 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 CMA1P23946 247 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 KRT85P78386 507 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 CREB5Q02930 508 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 EML3Q32P44 896 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 L1TD1Q5T7N2 865 aaKnown RBP12.52□□□□□ -0.41
MRPL55-213ENST00000366740 PMS2CLQ68D20 193 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 SLFN12LQ6IEE8 588 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 CNNM4Q6P4Q7 775 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 CRELD2Q6UXH1 353 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-213ENST00000366740 C11orf74Q86VG3 221 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 RASSF3Q86WH2 238 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 GRAMD1CQ8IYS0 662 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 KDF1Q8NAX2 398 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-213ENST00000366740 ATP2A3Q93084 1043 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 PKMYT1Q99640 499 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 C7orf25Q9BPX7 421 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 PI4K2AQ9BTU6 479 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 BLZF1Q9H2G9 400 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 ABCB6Q9NP58 842 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 DUS2Q9NX74 493 aaKnown RBP12.52□□□□□ -0.41
MRPL55-213ENST00000366740 FAM13BQ9NYF5 915 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 UXTQ9UBK9 157 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-213ENST00000366740 SERTAD1Q9UHV2 236 aa12.52□□□□□ -0.41
MRPL55-213ENST00000366740 RALYQ9UKM9 306 aaKnown RBP12.52□□□□□ -0.41
MRPL55-213ENST00000366740 AGO2Q9UKV8 859 aaKnown RBP12.52□□□□□ -0.41
MRPL55-213ENST00000366740 CACNA1EQ15878 2313 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 CACNA1GO43497 2377 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.51□□□□□ -0.41
MRPL55-213ENST00000366740 GIPC1O14908 333 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 ACTN4O43707 911 aaKnown RBP12.51□□□□□ -0.41
MRPL55-213ENST00000366740 PRPF40AO75400 957 aaKnown RBP12.51□□□□□ -0.41
MRPL55-213ENST00000366740 GCNT3O95395 438 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 CSRP1P21291 193 aaKnown RBP12.51□□□□□ -0.41
MRPL55-213ENST00000366740 HOXD13P35453 343 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 PNPLA4P41247 253 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 AFMP43652 599 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 RPL10AP62906 217 aaKnown RBP12.51□□□□□ -0.41
MRPL55-213ENST00000366740 TSPY1Q01534 308 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 EHHADHQ08426 723 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 ZNF252P-AS1Q0IIN9 211 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 CUL4BQ13620 913 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 INTS6LQ5JSJ4 861 aaKnown RBP12.51□□□□□ -0.41
MRPL55-213ENST00000366740 SDHAF4Q5VUM1 108 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms