RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 MAMSTRQ6ZN01 415 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 ZNF662Q6ZS27 426 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 FMNL3Q8IVF7 1028 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 GLYCTKQ8IVS8 523 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 PIP4P2Q8N4L2 257 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 SMG8Q8ND04 991 aaKnown RBP12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 LMO3Q8TAP4 145 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 C16orf45Q96MC5 204 aaPredicted RBP12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 EIF3CQ99613 913 aaKnown RBP12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 FAM213AQ9BRX8 229 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 MSTO1Q9BUK6 570 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 GPR62Q9BZJ7 368 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 INO80BQ9C086 356 aaPredicted RBP12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 HAPLN2Q9GZV7 340 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 NHEJ1Q9H9Q4 299 aaPredicted RBP12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 IFT122Q9HBG6 1241 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 TMEM8AQ9HCN3 771 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 NLRC4Q9NPP4 1024 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 CHST7Q9NS84 486 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 PRMT7Q9NVM4 692 aaPredicted RBP12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 FNIP2Q9P278 1114 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 CACNG4Q9UBN1 327 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 COQ4Q9Y3A0 265 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 FHOD1Q9Y613 1164 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 CNTNAP2Q9UHC6 1331 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 FLNBO75369 2602 aaKnown RBP12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 IGSF10Q6WRI0 2623 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 LRRIQ3A6PVS8 624 aaPredicted RBP12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 C1QTNF9BB2RNN3 333 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 ABLIM1O14639 778 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 CLDN3O15551 220 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 LCA5LO95447 670 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 C1QTNF9P0C862 333 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 ANXA13P27216 316 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 HOXC13P31276 330 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 OR1G1P47890 313 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 LIMK1P53667 647 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 JAM2P57087 298 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 KRT83P78385 493 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 MBTD1Q05BQ5 628 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 MCL1Q07820 350 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 DSC1Q08554 894 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 HGSNATQ68CP4 663 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 KRT39Q6A163 491 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 CRELD2Q6UXH1 353 aaPredicted RBP12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 UNQ6494/PRO21346Q6UXR6 183 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 CATSPER4Q7RTX7 472 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 ZNF410Q86VK4 478 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 ITFG1Q8TB96 612 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 RABGGTAQ92696 567 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 ZBTB45Q96K62 511 aaPredicted RBP12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 PRIMPOLQ96LW4 560 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 CCDC42Q96M95 316 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 NLRP4Q96MN2 994 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 SPAG5Q96R06 1193 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 DESI2Q9BSY9 194 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 STK33Q9BYT3 514 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 PLA2G2FQ9BZM2 168 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 CHRDQ9H2X0 955 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 PTPRHQ9HD43 1115 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 HEBP1Q9NRV9 189 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 ARHGAP20Q9P2F6 1191 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 APEX2Q9UBZ4 518 aa12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 BZW2Q9Y6E2 419 aaKnown RBP12.02□□□□□ -0.49
CSNK1E-202ENST00000366216 SOBPA7XYQ1 873 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 INO80B-WBP1J3KQ70 363 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 TM4SF5O14894 197 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 OGTO15294 1046 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 IPO7O95373 1038 aaKnown RBP12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 HNRNPA1P09651 372 aaKnown RBP eCLIP12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 PRKCIP41743 596 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 STAT1P42224 750 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 MATR3P43243 847 aaKnown RBP eCLIP12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 GCLMP48507 274 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 CCR3P51677 355 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 ETF1P62495 437 aaKnown RBP12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 POU5F1Q01860 360 aaKnown RBP12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 APBA1Q02410 837 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 CREMQ03060 361 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 PRPF4BQ13523 1007 aaKnown RBP12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 SURF1Q15526 300 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 ASIC2Q16515 512 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 ASTE1Q2TB18 679 aaPredicted RBP12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 IQCEQ6IPM2 695 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 MPZL3Q6UWV2 235 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 SRGAP1Q7Z6B7 1085 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 KDF1Q8NAX2 398 aaPredicted RBP12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 ACRBPQ8NEB7 543 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 GSTCDQ8NEC7 633 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 CCDC127Q96BQ5 260 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 ZFP42Q96MM3 310 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 IER2Q9BTL4 223 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 ANKFY1Q9P2R3 1169 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 NDRG2Q9UN36 371 aaKnown RBP12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 TNFSF13BQ9Y275 285 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 REXO2Q9Y3B8 237 aaKnown RBP12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 PAXBP1Q9Y5B6 917 aa12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 ASH1LQ9NR48 2969 aaKnown RBP12.01□□□□□ -0.49
CSNK1E-202ENST00000366216 ZNF638Q14966 1978 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms