RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ERC2O15083 957 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 FAM163BP0C2L3 166 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 BRAFP15056 766 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 ZKSCAN1P17029 563 aaPredicted RBP5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 NDUFB7P17568 137 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 EN2P19622 333 aaPredicted RBP5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 GPD1P21695 349 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 CYP2C18P33260 490 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 ALDH9A1P49189 494 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 PDE1AP54750 535 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 PROK1P58294 105 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 GALEQ14376 348 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 KIAA0753Q2KHM9 967 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 FAM153CQ494X1 144 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 TMEM119Q4V9L6 283 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 PLAC9Q5JTB6 97 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 RNF220Q5VTB9 566 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 ZNF551Q7Z340 670 aaPredicted RBP5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 XAGE5Q8WWM1 108 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 PPP2R3CQ969Q6 453 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 TIFAQ96CG3 184 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 FAM204AQ9H8W3 233 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 DLL3Q9NYJ7 618 aa5.62□□□□□ -1.51
RNU4-28P-201ENST00000364739 TPP1O14773 563 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 SLC16A3O15427 465 aaKnown RBP5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 MAP4K4O95819 1239 aaPredicted RBP5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 HNRNPCP07910 306 aaKnown RBP eCLIP5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 ENGP17813 658 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 ATF3P18847 181 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 DRD4P21917 467 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 KCNA3P22001 575 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 PPIFP30405 207 aaKnown RBP5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 DGKEP52429 567 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 C21orf58P58505 322 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 FMO1Q01740 532 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 GFOD2Q3B7J2 385 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 ZNF618Q5T7W0 954 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 KCTD20Q7Z5Y7 419 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 MICU3Q86XE3 530 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 SLC15A3Q8IY34 581 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 LRRC71Q8N4P6 559 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 BPIFB1Q8TDL5 484 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 WDR26Q9H7D7 661 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 GLOD4Q9HC38 313 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 GBA2Q9HCG7 927 aaPredicted RBP5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 OBP2AQ9NY56 170 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 PCDHGB6Q9Y5F9 930 aa5.61□□□□□ -1.51
RNU4-28P-201ENST00000364739 AOX1Q06278 1338 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 GOLGA6CA6NDK9 693 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 GOLGA6BA6NDN3 693 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 H0YIZ8 118 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 TLR5O60602 858 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 GOLGA6DP0CG33 693 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 CYP2C9P11712 490 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 WT1P19544 449 aaPredicted RBP5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 LRPAP1P30533 357 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 ITGA8P53708 1063 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 ATXN1P54253 815 aaKnown RBP5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 MRPS21P82921 87 aaKnown RBP5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 RAB32Q13637 225 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 CNGA2Q16280 664 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 CCDC142Q17RM4 750 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 MGAT5BQ3V5L5 792 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 PPP4R4Q6NUP7 873 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 ZNF788Q6ZQV5 615 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 GAS2L3Q86XJ1 694 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 SARAFQ96BY9 339 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 MACROD1Q9BQ69 325 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 APOL5Q9BWW9 433 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 STK31Q9BXU1 1019 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 GOLGA6AQ9NYA3 693 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 PADI4Q9UM07 663 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 TNFRSF18Q9Y5U5 241 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 SNX14Q9Y5W7 946 aa5.6□□□□□ -1.51
RNU4-28P-201ENST00000364739 MANSC4A6NHS7 340 aaPredicted RBP5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 MARCH6O60337 910 aa5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 RBMXL2O75526 392 aaKnown RBP5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 NXPH3O95157 252 aa5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 C1RP00736 705 aa5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 XRCC6P12956 609 aaKnown RBP eCLIP5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 CD38P28907 300 aa5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 PRKAG1P54619 331 aa5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 WNT3P56703 355 aa5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 SYCE2Q6PIF2 218 aa5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 DPY19L3Q6ZPD9 716 aa5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 CHST15Q7LFX5 561 aaPredicted RBP5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 SESTD1Q86VW0 696 aa5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 ABRAQ8N0Z2 381 aa5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 LRTOMTQ8WZ04 291 aa5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 ZNF518BQ9C0D4 1074 aa5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 A1CFQ9NQ94 594 aaKnown RBP5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 SH3BP4Q9P0V3 963 aa5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 CCNL1Q9UK58 526 aaPredicted RBP5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 WNT6Q9Y6F9 365 aa5.59□□□□□ -1.51
RNU4-28P-201ENST00000364739 SETD1BQ9UPS6 1966 aaKnown RBP5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 H7C4K7 107 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 GCOM1H8Y6P7 765 aaPredicted RBP5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 PYCARD-AS1I3L0S3 204 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 QSOX1O00391 747 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 ZNF213O14771 459 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms