RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 KATNAL1Q9BW62 490 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 SORBS1Q9BX66 1292 aaKnown RBP4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 TRIM5Q9C035 493 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 PCDHAC1Q9H158 963 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 SMOC2Q9H3U7 446 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 ZNF69Q9UC07 566 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 KCNE5Q9UJ90 142 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 ANAPC4Q9UJX5 808 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 DTNAQ9Y4J8 743 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 AATKQ6ZMQ8 1374 aa4.4□□□□□ -1.7
RNU6-28P-201ENST00000362378 PRAMEF33A0A0G2JMD5 474 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 OR2W5A6NFC9 320 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 TRIM38O00635 465 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 PRICKLE3O43900 615 aaPredicted RBP4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 PRAMEF10O60809 474 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 ZNF623O75123 536 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 PIAS2O75928 621 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 CFIP05156 583 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 HLA-DOAP06340 250 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 ZSCAN22P10073 491 aaPredicted RBP4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 NPPBP16860 134 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 ITGALP20701 1170 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 ACO1P21399 889 aaKnown RBP4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 PPIFP30405 207 aaKnown RBP4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 POLE2P56282 527 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 MC2RQ01718 297 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 KRT17Q04695 432 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 MYO1EQ12965 1108 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 DYRK1AQ13627 763 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 HLXQ14774 488 aaPredicted RBP4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 RALBP1Q15311 655 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 ARHGAP15Q53QZ3 475 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 UBXN11Q5T124 520 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 FAXCQ5TGI0 409 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 MANEALQ5VSG8 457 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 SFRP4Q6FHJ7 346 aaPredicted RBP4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 LIN54Q6MZP7 749 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 JMJD6Q6NYC1 403 aaPredicted RBP4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 MZT2AQ6P582 158 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 TMEM108Q6UXF1 575 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 CYP26C1Q6V0L0 522 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 RFX8Q6ZV50 586 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 GDF7Q7Z4P5 450 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 TMEM132CQ8N3T6 1108 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 FAM109AQ8N4B1 249 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 PPP2R3CQ969Q6 453 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 TBATAQ96M53 351 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 TEPSINQ96N21 525 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 ZSWIM1Q9BR11 485 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 ITM2CQ9NQX7 267 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 C9orf78Q9NZ63 289 aaPredicted RBP4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 RNF181Q9P0P0 153 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 EIF2B4Q9UI10 523 aaKnown RBP4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 SCAF8Q9UPN6 1271 aaKnown RBP4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 JAG2Q9Y219 1238 aa4.4□□□□□ -1.71
RNU6-28P-201ENST00000362378 MARCH11A6NNE9 402 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 AHRRA9YTQ3 701 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 hCG_1984214I3L0E3 225 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 IPO5O00410 1097 aaKnown RBP4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 TOR1BO14657 336 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 COQ9O75208 318 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 RPS6KA4O75676 772 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 WDHD1O75717 1129 aaPredicted RBP4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 TNFRSF6BO95407 300 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 NTSR2O95665 410 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 ITGB3P05106 788 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 PECAM1P16284 738 aaPredicted RBP4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 MST1P26927 711 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 HIBADHP31937 336 aaKnown RBP4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 RPS7P62081 194 aaKnown RBP4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 NSUN2Q08J23 767 aaKnown RBP eCLIP4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 CNGB1Q14028 1251 aaPredicted RBP4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 KCNAB1Q14722 419 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 PTCHD3Q3KNS1 767 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 CACHD1Q5VU97 1274 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 B3GNTL1Q67FW5 361 aaPredicted RBP4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 CCDC70Q6NSX1 233 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 LVRNQ6Q4G3 990 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 LCNL1Q6ZST4 164 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 MICALCLQ6ZW33 695 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 GATAD2AQ86YP4 633 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 FAM9AQ8IZU1 332 aaPredicted RBP4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 OTUD7AQ8TE49 926 aaPredicted RBP4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 ZDHHC12Q96GR4 267 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 BOD1Q96IK1 185 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 ZNF668Q96K58 619 aaPredicted RBP4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 WWC2-AS2Q96NR7 200 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 OSBPL9Q96SU4 736 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 PRPF18Q99633 342 aaKnown RBP4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 TEX101Q9BY14 249 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 CXorf36Q9H7Y0 433 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 CD248Q9HCU0 757 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 TMEM74BQ9NUR3 256 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 HERC5Q9UII4 1024 aaKnown RBP4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 GJD2Q9UKL4 321 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 NDRG4Q9ULP0 352 aaKnown RBP4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 LZTS1Q9Y250 596 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 HPSEQ9Y251 543 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 MRPS17Q9Y2R5 130 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms