RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 ADSSP30520 456 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 FLT3P36888 993 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 RPS6P62753 249 aaKnown RBP7.8□□□□□ -1.16
CLCN3-202ENST00000360642 PIN1Q13526 163 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-202ENST00000360642 GAS6Q14393 721 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 HLTFQ14527 1009 aaKnown RBP eCLIP7.8□□□□□ -1.16
CLCN3-202ENST00000360642 DNAJC21Q5F1R6 531 aaKnown RBP7.8□□□□□ -1.16
CLCN3-202ENST00000360642 C11orf63Q6NUN7 778 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 FAM71AQ8IYT1 594 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 ALG3Q92685 438 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 RAVER2Q9HCJ3 691 aaKnown RBP7.8□□□□□ -1.16
CLCN3-202ENST00000360642 CACNA2D2Q9NY47 1150 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 PFASO15067 1338 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 TMEM150BA6NC51 233 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 ZEB2O60315 1214 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 DLX3O60479 287 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 MTA2O94776 668 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 CCNE2O96020 404 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 FTLP02792 175 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-202ENST00000360642 ADRB2P07550 413 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 SRGAP2CP0DJJ0 459 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 ALAS1P13196 640 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 CORO7P57737 925 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 PSMC5P62195 406 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 CXCL9Q07325 125 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 SLC20A2Q08357 652 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 ODF1Q14990 250 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 SLC17A8Q8NDX2 589 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 BCAS4Q8TDM0 211 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 ATP8B4Q8TF62 1192 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 IWS1Q96ST2 819 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 PCDHB18PQ96TA0 734 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 TXLNGYQ9BZA5 131 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 CELF4Q9BZC1 486 aaKnown RBP7.8□□□□□ -1.16
CLCN3-202ENST00000360642 ARNT2Q9HBZ2 717 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 MYOZ2Q9NPC6 264 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 FAM114A2Q9NRY5 505 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 RAD18Q9NS91 495 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 ANKEF1Q9NU02 776 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 NOCTQ9UK39 431 aaKnown RBP7.8□□□□□ -1.16
CLCN3-202ENST00000360642 STARD13Q9Y3M8 1113 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 ALG6Q9Y672 507 aa7.8□□□□□ -1.16
CLCN3-202ENST00000360642 M0R082 166 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 PLD2O14939 933 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 RTN2O75298 545 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 CLEC3AO75596 197 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 MYL3P08590 195 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 GZMAP12544 262 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 NR1D1P20393 614 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 JAK3P52333 1124 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 EPHB1P54762 984 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 PEX3P56589 373 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 ZNF844Q08AG5 666 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 CLUL1Q15846 466 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 TBC1D10BQ4KMP7 808 aaPredicted RBP7.79□□□□□ -1.16
CLCN3-202ENST00000360642 CEP85LQ5SZL2 805 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 TTC19Q6DKK2 380 aaPredicted RBP7.79□□□□□ -1.16
CLCN3-202ENST00000360642 USP53Q70EK8 1073 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 TMC3Q7Z5M5 1100 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 ZBTB46Q86UZ6 589 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 CPXCR1Q8N123 301 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 ZNF513Q8N8E2 541 aaPredicted RBP7.79□□□□□ -1.16
CLCN3-202ENST00000360642 TMEM161BQ8NDZ6 487 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 ZNF417Q8TAU3 575 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 KAT5Q92993 513 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 KREMEN1Q96MU8 473 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 ZNF587Q96SQ5 575 aaPredicted RBP7.79□□□□□ -1.16
CLCN3-202ENST00000360642 NAP1L3Q99457 506 aaPredicted RBP7.79□□□□□ -1.16
CLCN3-202ENST00000360642 SH2D3AQ9BRG2 576 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 PDGFDQ9GZP0 370 aaPredicted RBP7.79□□□□□ -1.16
CLCN3-202ENST00000360642 RABEP2Q9H5N1 569 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 ERVK-5Q9HDB9 667 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 PXMP2Q9NR77 195 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 STK32BQ9NY57 414 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 COQ4Q9Y3A0 265 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 UTP11Q9Y3A2 253 aaKnown RBP7.79□□□□□ -1.16
CLCN3-202ENST00000360642 SLC16A4O15374 487 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 AOC2O75106 756 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 DPEP1P16444 411 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 SFNP31947 248 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 PEX5P50542 639 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 GPC5P78333 572 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 LAMC2Q13753 1193 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 SPDYCQ5MJ68 293 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 DUPD1Q68J44 220 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 TSHZ1Q6ZSZ6 1077 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 DMRTC2Q8IXT2 367 aaPredicted RBP7.79□□□□□ -1.16
CLCN3-202ENST00000360642 JPH3Q8WXH2 748 aaPredicted RBP7.79□□□□□ -1.16
CLCN3-202ENST00000360642 SHC3Q92529 594 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 SEMA4DQ92854 862 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 CD101Q93033 1021 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 FBXL18Q96ME1 805 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 SENP7Q9BQF6 1050 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 PDCD2LQ9BRP1 358 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 NTPCRQ9BSD7 190 aaKnown RBP7.79□□□□□ -1.16
CLCN3-202ENST00000360642 PPCSQ9HAB8 311 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 SEPT11Q9NVA2 429 aaKnown RBP7.79□□□□□ -1.16
CLCN3-202ENST00000360642 TBX20Q9UMR3 447 aa7.79□□□□□ -1.16
CLCN3-202ENST00000360642 MIF4GDA9UHW6 222 aaKnown RBP7.78□□□□□ -1.16
CLCN3-202ENST00000360642 WDR64B1ANS9 1081 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms