RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 PMF1Q6P1K2 205 aa26.28■■□□□ 1.8
SHARPIN-201ENST00000359551 TAS1R1Q7RTX1 841 aa26.28■■□□□ 1.8
SHARPIN-201ENST00000359551 CEP57Q86XR8 500 aa26.28■■□□□ 1.8
SHARPIN-201ENST00000359551 FIBCD1Q8N539 461 aa26.28■■□□□ 1.8
SHARPIN-201ENST00000359551 CLP1Q92989 425 aaKnown RBP26.28■■□□□ 1.8
SHARPIN-201ENST00000359551 MYLPFQ96A32 169 aa26.28■■□□□ 1.8
SHARPIN-201ENST00000359551 C18orf8Q96DM3 657 aa26.28■■□□□ 1.8
SHARPIN-201ENST00000359551 ALS2CR12Q96Q35 445 aa26.28■■□□□ 1.8
SHARPIN-201ENST00000359551 CHST7Q9NS84 486 aa26.28■■□□□ 1.8
SHARPIN-201ENST00000359551 TMLHEQ9NVH6 421 aa26.28■■□□□ 1.8
SHARPIN-201ENST00000359551 SPG21Q9NZD8 308 aa26.28■■□□□ 1.8
SHARPIN-201ENST00000359551 DNAI1Q9UI46 699 aa26.28■■□□□ 1.8
SHARPIN-201ENST00000359551 TULP2O00295 520 aa26.27■■□□□ 1.8
SHARPIN-201ENST00000359551 XPO1O14980 1071 aaKnown RBP26.27■■□□□ 1.8
SHARPIN-201ENST00000359551 NPR3P17342 541 aa26.27■■□□□ 1.8
SHARPIN-201ENST00000359551 PPM1AP35813 382 aa26.27■■□□□ 1.8
SHARPIN-201ENST00000359551 PLA2G4AP47712 749 aa26.27■■□□□ 1.8
SHARPIN-201ENST00000359551 NAP1L1P55209 391 aaKnown RBP26.27■■□□□ 1.8
SHARPIN-201ENST00000359551 USP41Q3LFD5 358 aa26.27■■□□□ 1.8
SHARPIN-201ENST00000359551 ANKS3Q6ZW76 656 aa26.27■■□□□ 1.8
SHARPIN-201ENST00000359551 TMEM110Q86TL2 294 aa26.27■■□□□ 1.8
SHARPIN-201ENST00000359551 TMEM169Q96HH4 297 aa26.27■■□□□ 1.8
SHARPIN-201ENST00000359551 B3GALT6Q96L58 329 aa26.27■■□□□ 1.8
SHARPIN-201ENST00000359551 MED10Q9BTT4 135 aa26.27■■□□□ 1.8
SHARPIN-201ENST00000359551 NUP85Q9BW27 656 aa26.27■■□□□ 1.8
SHARPIN-201ENST00000359551 AAASQ9NRG9 546 aa26.27■■□□□ 1.8
SHARPIN-201ENST00000359551 WDR35Q9P2L0 1181 aa26.27■■□□□ 1.8
SHARPIN-201ENST00000359551 TJP2Q9UDY2 1190 aa26.27■■□□□ 1.8
SHARPIN-201ENST00000359551 SCINQ9Y6U3 715 aa26.27■■□□□ 1.8
SHARPIN-201ENST00000359551 GRID2IPA4D2P6 1211 aa26.26■■□□□ 1.79
SHARPIN-201ENST00000359551 H7C4K7 107 aa26.26■■□□□ 1.79
SHARPIN-201ENST00000359551 ERBB2P04626 1255 aa26.26■■□□□ 1.79
SHARPIN-201ENST00000359551 FAM200BP0CF97 657 aa26.26■■□□□ 1.79
SHARPIN-201ENST00000359551 CTXN3Q4LDR2 81 aa26.26■■□□□ 1.79
SHARPIN-201ENST00000359551 LLGL2Q6P1M3 1020 aa26.26■■□□□ 1.79
SHARPIN-201ENST00000359551 CLEC20AQ6ZU45 233 aa26.26■■□□□ 1.79
SHARPIN-201ENST00000359551 DCP1BQ8IZD4 617 aaKnown RBP26.26■■□□□ 1.79
SHARPIN-201ENST00000359551 LRRC57Q8N9N7 239 aa26.26■■□□□ 1.79
SHARPIN-201ENST00000359551 IPO4Q8TEX9 1081 aaKnown RBP26.26■■□□□ 1.79
SHARPIN-201ENST00000359551 HSFY1Q96LI6 401 aa26.26■■□□□ 1.79
SHARPIN-201ENST00000359551 MIS12Q9H081 205 aa26.26■■□□□ 1.79
SHARPIN-201ENST00000359551 MRPL47Q9HD33 250 aaKnown RBP26.26■■□□□ 1.79
SHARPIN-201ENST00000359551 PARVAQ9NVD7 372 aa26.26■■□□□ 1.79
SHARPIN-201ENST00000359551 CHORDC1Q9UHD1 332 aaPredicted RBP26.26■■□□□ 1.79
SHARPIN-201ENST00000359551 SOD2P04179 222 aa26.25■■□□□ 1.79
SHARPIN-201ENST00000359551 MAMLD1Q13495 774 aa26.25■■□□□ 1.79
SHARPIN-201ENST00000359551 ZNF268Q14587 947 aaPredicted RBP26.25■■□□□ 1.79
SHARPIN-201ENST00000359551 XYLT1Q86Y38 959 aa26.25■■□□□ 1.79
SHARPIN-201ENST00000359551 C3orf20Q8ND61 904 aa26.25■■□□□ 1.79
SHARPIN-201ENST00000359551 ZNF564Q8TBZ8 553 aaPredicted RBP26.25■■□□□ 1.79
SHARPIN-201ENST00000359551 SMARCD1Q96GM5 515 aa26.25■■□□□ 1.79
SHARPIN-201ENST00000359551 HERC2P3Q9BVR0 1158 aa26.25■■□□□ 1.79
SHARPIN-201ENST00000359551 CSNK1G1Q9HCP0 422 aa26.25■■□□□ 1.79
SHARPIN-201ENST00000359551 KRT82Q9NSB4 513 aa26.25■■□□□ 1.79
SHARPIN-201ENST00000359551 GBF1Q92538 1859 aa26.25■■□□□ 1.79
SHARPIN-201ENST00000359551 PALMO75781 387 aa26.25■■□□□ 1.79
SHARPIN-201ENST00000359551 SLC8A3P57103 927 aa26.25■■□□□ 1.79
SHARPIN-201ENST00000359551 CYP4A22Q5TCH4 519 aa26.25■■□□□ 1.79
SHARPIN-201ENST00000359551 C4orf50Q6ZRC1 276 aa26.25■■□□□ 1.79
SHARPIN-201ENST00000359551 SLFN11Q7Z7L1 901 aa26.25■■□□□ 1.79
SHARPIN-201ENST00000359551 DDX53Q86TM3 631 aaKnown RBP26.25■■□□□ 1.79
SHARPIN-201ENST00000359551 PIK3R5Q8WYR1 880 aa26.25■■□□□ 1.79
SHARPIN-201ENST00000359551 E5RJQ4 531 aa26.24■■□□□ 1.79
SHARPIN-201ENST00000359551 TLL1O43897 1013 aa26.24■■□□□ 1.79
SHARPIN-201ENST00000359551 GABBR2O75899 941 aa26.24■■□□□ 1.79
SHARPIN-201ENST00000359551 BEST1O76090 585 aa26.24■■□□□ 1.79
SHARPIN-201ENST00000359551 MAGEA10P43363 369 aaPredicted RBP26.24■■□□□ 1.79
SHARPIN-201ENST00000359551 SNX16P57768 344 aa26.24■■□□□ 1.79
SHARPIN-201ENST00000359551 PPP1R15BQ5SWA1 713 aa26.24■■□□□ 1.79
SHARPIN-201ENST00000359551 KIF18AQ8NI77 898 aa26.24■■□□□ 1.79
SHARPIN-201ENST00000359551 KCTD13Q8WZ19 329 aa26.24■■□□□ 1.79
SHARPIN-201ENST00000359551 MCRS1Q96EZ8 462 aa26.24■■□□□ 1.79
SHARPIN-201ENST00000359551 SMOQ99835 787 aa26.24■■□□□ 1.79
SHARPIN-201ENST00000359551 UBXN6Q9BZV1 441 aa26.24■■□□□ 1.79
SHARPIN-201ENST00000359551 SYNCQ9H7C4 482 aa26.24■■□□□ 1.79
SHARPIN-201ENST00000359551 ST7Q9NRC1 585 aa26.24■■□□□ 1.79
SHARPIN-201ENST00000359551 MTRRQ9UBK8 725 aa26.24■■□□□ 1.79
SHARPIN-201ENST00000359551 PCDHB12Q9Y5F1 795 aa26.24■■□□□ 1.79
SHARPIN-201ENST00000359551 BACE2Q9Y5Z0 518 aa26.24■■□□□ 1.79
SHARPIN-201ENST00000359551 PLXNA4Q9HCM2 1894 aa26.24■■□□□ 1.79
SHARPIN-201ENST00000359551 BUB1BO60566 1050 aaPredicted RBP26.23■■□□□ 1.79
SHARPIN-201ENST00000359551 AP1G2O75843 785 aa26.23■■□□□ 1.79
SHARPIN-201ENST00000359551 ACADSBP45954 432 aa26.23■■□□□ 1.79
SHARPIN-201ENST00000359551 RGS7P49802 495 aa26.23■■□□□ 1.79
SHARPIN-201ENST00000359551 NFE2Q16621 373 aaPredicted RBP26.23■■□□□ 1.79
SHARPIN-201ENST00000359551 DNTTIP2Q5QJE6 756 aaKnown RBP26.23■■□□□ 1.79
SHARPIN-201ENST00000359551 PIGZQ86VD9 579 aa26.23■■□□□ 1.79
SHARPIN-201ENST00000359551 ZMIZ2Q8NF64 920 aa26.23■■□□□ 1.79
SHARPIN-201ENST00000359551 TMEM30AQ9NV96 361 aa26.23■■□□□ 1.79
SHARPIN-201ENST00000359551 STK39Q9UEW8 545 aa26.23■■□□□ 1.79
SHARPIN-201ENST00000359551 OR4Q2P0C623 313 aa26.22■■□□□ 1.79
SHARPIN-201ENST00000359551 CASQ1P31415 396 aa26.22■■□□□ 1.79
SHARPIN-201ENST00000359551 CFAP221Q4G0U5 840 aa26.22■■□□□ 1.79
SHARPIN-201ENST00000359551 SLC39A12Q504Y0 691 aa26.22■■□□□ 1.79
SHARPIN-201ENST00000359551 C9orf50Q5SZB4 431 aa26.22■■□□□ 1.79
SHARPIN-201ENST00000359551 C11orf63Q6NUN7 778 aa26.22■■□□□ 1.79
SHARPIN-201ENST00000359551 DNAJC24Q6P3W2 148 aa26.22■■□□□ 1.79
SHARPIN-201ENST00000359551 PHLDB2Q86SQ0 1253 aa26.22■■□□□ 1.79
SHARPIN-201ENST00000359551 FUBP3Q96I24 572 aaKnown RBP eCLIP26.22■■□□□ 1.79
SHARPIN-201ENST00000359551 ABCB6Q9NP58 842 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms