RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 C6orf10Q5SRN2 563 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 RASSF5Q8WWW0 418 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 TSPAN17Q96FV3 270 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 FAM8A1Q9UBU6 413 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 SERPINB13Q9UIV8 391 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 AGAP1Q9UPQ3 857 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 RAD51BO15315 384 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 POLR2EP19388 210 aaKnown RBP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 DGKDQ16760 1214 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 C12orf60Q5U649 245 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 BROXQ5VW32 411 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 SLFN13Q68D06 897 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 SEPT1Q8WYJ6 367 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 ATXN7L3BQ96GX2 97 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 COX4I2Q96KJ9 171 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 TUBGCP5Q96RT8 1024 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 GINS4Q9BRT9 223 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 CHD4Q14839 1912 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 ZBTB39O15060 712 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 SHBGP04278 402 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 SERPINE1P05121 402 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 TFE3P19532 575 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 PDIA5Q14554 519 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 ACSBG1Q96GR2 724 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 PCSK1NQ9UHG2 260 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 STARD13Q9Y3M8 1113 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 PRR23AA6NEV1 266 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 MYMKA6NI61 221 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 PRELPP51888 382 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 MPP3Q13368 585 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 TRADDQ15628 312 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 C4orf50Q6ZRC1 276 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 PDPRQ8NCN5 879 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 FBXO36Q8NEA4 188 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 HEY1Q9Y5J3 304 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 RHOBTB1O94844 696 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 RPL21P46778 160 aaKnown RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 CHRNB3Q05901 458 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 KCNA1Q09470 495 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 TCHHL1Q5QJ38 904 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 TUBA3EQ6PEY2 450 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 DHFR2Q86XF0 187 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 IQCKQ8N0W5 287 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 PSMA8Q8TAA3 256 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 FRMD8Q9BZ67 464 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 ACTL7BQ9Y614 415 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 EMSYQ7Z589 1322 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 SLC16A4O15374 487 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 TLR3O15455 904 aaKnown RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 LDHAP00338 332 aaKnown RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 CCT3P49368 545 aaKnown RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 ITGA7Q13683 1181 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 SNX17Q15036 470 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 SLC26A11Q86WA9 606 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 TAGAPQ8N103 731 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 ZCCHC9Q8N567 271 aaKnown RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 SKA2Q8WVK7 121 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 OLFM1Q99784 485 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 OSBPL11Q9BXB4 747 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 CACNA2D2Q9NY47 1150 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 SLC13A4Q9UKG4 626 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 MED26O95402 600 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 SARSP49591 514 aaKnown RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 SGSM1Q2NKQ1 1148 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 CCDC149Q6ZUS6 474 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 SCFD1Q8WVM8 642 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 MKL2Q9ULH7 1088 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 PAMP19021 973 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 DYNLL1P63167 89 aaKnown RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 ZNF571Q7Z3V5 609 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 ZBTB38Q8NAP3 1195 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 USP17L5A8MUK1 530 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 CHRNDQ07001 517 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 SPIDRQ14159 915 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 SYDE2Q5VT97 1194 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 FAXDC2Q96IV6 333 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 HEXIM2Q96MH2 286 aaKnown RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 PPME1Q9Y570 386 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 ARFGEF3Q5TH69 2177 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 PLEKHG3A1L390 1219 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 ZNF862O60290 1169 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 TBXAS1P24557 533 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 UBE2SQ16763 222 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 SPANXN2Q5MJ10 180 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 N4BP2L1Q5TBK1 243 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 AAGABQ6PD74 315 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 PLEKHM3Q6ZWE6 761 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 BHLHE22Q8NFJ8 381 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 RBBP8Q99708 897 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 WDR12Q9GZL7 423 aaKnown RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 POLR1BQ9H9Y6 1135 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 SPEF1Q9Y4P9 236 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 ATP7BP35670 1465 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 CYP2D6P10635 497 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 CDH6P55285 790 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 ZC3H12BQ5HYM0 836 aaKnown RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 HEATR6Q6AI08 1181 aaKnown RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 SLFN12LQ6IEE8 588 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 TTC27Q6P3X3 843 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms