RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 RPS6KA1Q15418 735 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 LRRC36Q1X8D7 754 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 MFSD5Q6N075 450 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 BTNL9Q6UXG8 535 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 VPS36Q86VN1 386 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 GRAMD1AQ96CP6 724 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 TTC1Q99614 292 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 PRPF18Q99633 342 aaKnown RBP9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 GLT8D2Q9H1C3 349 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 ARL8BQ9NVJ2 186 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 MOSPD1Q9UJG1 213 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 DMTF1Q9Y222 760 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 K7EPI3 171 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 SLC37A4O43826 429 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 HAUS5O94927 633 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 VCLP18206 1134 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 CHN2P52757 468 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 NOP14P78316 857 aaKnown RBP9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 MTMR2Q13614 643 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 PDK3Q15120 406 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 KCNJ8Q15842 424 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 DUPD1Q68J44 220 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 RRAGAQ7L523 313 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 ALDH16A1Q8IZ83 802 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 SLC38A6Q8IZM9 456 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 MYO1HQ8N1T3 1032 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 OR6Y1Q8NGX8 325 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 CYP2W1Q8TAV3 490 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 C10orf82Q8WW14 230 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 ERGIC2Q96RQ1 377 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 P2RX7Q99572 595 aaKnown RBP9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 C2orf49Q9BVC5 232 aaPredicted RBP9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 SPZ1Q9BXG8 430 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 C6orf50Q9HD87 102 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 MAN1C1Q9NR34 630 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 DNAJC17Q9NVM6 304 aaKnown RBP9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 ZDHHC7Q9NXF8 308 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 SCHIP1Q9P0W5 487 aaPredicted RBP9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 ANGPTL2Q9UKU9 493 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 POTEMA6NI47 508 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 PGRMC1O00264 195 aaKnown RBP9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 AP1G1O43747 822 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 SORBS3O60504 671 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 CLPTM1O96005 669 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 OCM2P0CE71 109 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 OCMP0CE72 109 aaPredicted RBP9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 UQCRBP14927 111 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 PTPN2P17706 415 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 COPB2P35606 906 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 ADCY7P51828 1080 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 RCAN1P53805 252 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 DNAJC3Q13217 504 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 EFTUD2Q15029 972 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 SLC9C1Q4G0N8 1177 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 ASPRV1Q53RT3 343 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 SIGIRRQ6IA17 410 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 RASSF3Q86WH2 238 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 ANKRD13BQ86YJ7 626 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 PASD1Q8IV76 773 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 TMEM106CQ9BVX2 250 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 SLITRK6Q9H5Y7 841 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 PARVBQ9HBI1 364 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 PCDHGA3Q9Y5H0 932 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 ZNFX1Q9P2E3 1918 aaKnown RBP9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 LAMA2P24043 3122 aaKnown RBP9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 MYOCOSA0A1B0GUC4 107 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 CES2O00748 559 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 RIPK2O43353 540 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 FOXD2O60548 495 aaPredicted RBP9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 DCTN3O75935 186 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 BAG2O95816 211 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 PRKACBP22694 351 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 CALML3P27482 149 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 GSSP48637 474 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 MXI1P50539 228 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 PCSK7Q16549 785 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 HABP4Q5JVS0 413 aaKnown RBP9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 TMTC4Q5T4D3 741 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 TTI2Q6NXR4 508 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 PDXDC2PQ6P474 469 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 RNF111Q6ZNA4 994 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 USP43Q70EL4 1123 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 CLNKQ7Z7G1 428 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 MTDHQ86UE4 582 aaKnown RBP9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 NLRX1Q86UT6 975 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 ZNF410Q86VK4 478 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 KSR1Q8IVT5 923 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 LZTR1Q8N653 840 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 SOCS4Q8WXH5 440 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 BAP1Q92560 729 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 PTCD3Q96EY7 689 aaKnown RBP9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 RIOX1Q9H6W3 641 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 UVRAGQ9P2Y5 699 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 GJD2Q9UKL4 321 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 PRR12Q9ULL5 1215 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 PHTF1Q9UMS5 762 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 SIK3Q9Y2K2 1263 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 SNX24Q9Y343 169 aa9.74□□□□□ -0.85
SMARCAL1-202ENST00000358207 STARD13Q9Y3M8 1113 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms