RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 MTERF2Q49AM1 385 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 HSF5Q4G112 596 aaPredicted RBP10.62□□□□□ -0.71
PTPRA-203ENST00000356147 TFDP3Q5H9I0 405 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 CFAP157Q5JU67 520 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 RIPOR1Q6ZS17 1223 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 POU5F2Q8N7G0 328 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 TMC2Q8TDI7 906 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 TRIM11Q96F44 468 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 ANKRD27Q96NW4 1050 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 ZNF184Q99676 751 aaPredicted RBP10.62□□□□□ -0.71
PTPRA-203ENST00000356147 OCEL1Q9H607 264 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 IP6K2Q9UHH9 426 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 ZNRF3Q9ULT6 936 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 IKBKGQ9Y6K9 419 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 RBBP6Q7Z6E9 1792 aaKnown RBP10.62□□□□□ -0.71
PTPRA-203ENST00000356147 TMEM191CA6NGB0 347 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 F5H423 210 aaPredicted RBP10.61□□□□□ -0.71
PTPRA-203ENST00000356147 LMNAP02545 664 aaKnown RBP10.61□□□□□ -0.71
PTPRA-203ENST00000356147 TMEM191BP0C7N4 346 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 CDKN2BP42772 138 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 RPS6P62753 249 aaKnown RBP10.61□□□□□ -0.71
PTPRA-203ENST00000356147 ZACNQ401N2 412 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 SWSAP1Q6NVH7 229 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 ADGRD1Q6QNK2 874 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 JOSD2Q8TAC2 188 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 PYDC1Q8WXC3 89 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 HSPH1Q92598 858 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 CCDC124Q96CT7 223 aaKnown RBP10.61□□□□□ -0.71
PTPRA-203ENST00000356147 ZNF668Q96K58 619 aaPredicted RBP10.61□□□□□ -0.71
PTPRA-203ENST00000356147 RILPQ96NA2 401 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 PANX3Q96QZ0 392 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 TMEM39BQ9GZU3 492 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 TCRBV9S1A1TA0A576 114 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 TRIM49D1C9J1S8 452 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 C4BPAP04003 597 aaKnown RBP10.61□□□□□ -0.71
PTPRA-203ENST00000356147 INHBAP08476 426 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 RARBP10826 455 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 PHBP35232 272 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 RFC1P35251 1148 aaPredicted RBP10.61□□□□□ -0.71
PTPRA-203ENST00000356147 TMPRSS15P98073 1019 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 MMRN1Q13201 1228 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 PEX6Q13608 980 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 DPH6Q7L8W6 267 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 MMP19Q99542 508 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 EBF4Q9BQW3 602 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 TARS2Q9BW92 718 aaKnown RBP10.61□□□□□ -0.71
PTPRA-203ENST00000356147 CALN1Q9BXU9 219 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 ACSS3Q9H6R3 686 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 PCDH9Q9HC56 1237 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 PACSIN3Q9UKS6 424 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 SHOC2Q9UQ13 582 aa10.61□□□□□ -0.71
PTPRA-203ENST00000356147 FARP1Q9Y4F1 1045 aaPredicted RBP10.61□□□□□ -0.71
PTPRA-203ENST00000356147 ZNF536O15090 1300 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 CXorf49A8MYA2 514 aaPredicted RBP10.6□□□□□ -0.71
PTPRA-203ENST00000356147 PMM2O15305 246 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 RPS6KA3P51812 740 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 OCRLQ01968 901 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 AP1B1Q10567 949 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 BST1Q10588 318 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 PRKD1Q15139 912 aaPredicted RBP10.6□□□□□ -0.71
PTPRA-203ENST00000356147 RAB6CQ53S08 254 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 PODNQ7Z5L7 613 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 MFN1Q8IWA4 741 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 KIAA0319LQ8IZA0 1049 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 GSTCDQ8NEC7 633 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 SYTL5Q8TDW5 730 aaPredicted RBP10.6□□□□□ -0.71
PTPRA-203ENST00000356147 IFT43Q96FT9 208 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 FBXL18Q96ME1 805 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 C20orf27Q9GZN8 174 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 IQCGQ9H095 443 aaKnown RBP10.6□□□□□ -0.71
PTPRA-203ENST00000356147 RAB6CQ9H0N0 254 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 XPNPEP1Q9NQW7 623 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 RBAKQ9NYW8 714 aaPredicted RBP10.6□□□□□ -0.71
PTPRA-203ENST00000356147 STX18Q9P2W9 335 aaKnown RBP10.6□□□□□ -0.71
PTPRA-203ENST00000356147 AGO2Q9UKV8 859 aaKnown RBP10.6□□□□□ -0.71
PTPRA-203ENST00000356147 SCINQ9Y6U3 715 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 E2F8A0AVK6 867 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 ARHGAP42A6NI28 874 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 LRRIQ4A6NIV6 560 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 PRR5-ARHGAP8B1AHC4 643 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 LYNP07948 512 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 ANPEPP15144 967 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 MMP8P22894 467 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 PSMA2P25787 234 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 GSTT1P30711 240 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 GMPRP36959 345 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 EPHB1P54762 984 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 AQP5P55064 265 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 ARHGAP8P85298 464 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 C1orf146Q5VVC0 180 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 GPAT2Q6NUI2 795 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 PPIL6Q8IXY8 311 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 PDIK1LQ8N165 341 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 NAT8LQ8N9F0 302 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 CLEC4DQ8WXI8 215 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 GATA6Q92908 595 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 RMDN3Q96TC7 470 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 POLR3FQ9H1D9 316 aaPredicted RBP10.6□□□□□ -0.71
PTPRA-203ENST00000356147 VPS11Q9H270 941 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 IRAK4Q9NWZ3 460 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms