RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 HOXA9P31269 272 aa18.96■□□□□ 0.63
PDLIM7-202ENST00000355841 CLCN1P35523 988 aa18.96■□□□□ 0.63
PDLIM7-202ENST00000355841 MAGEA11P43364 429 aa18.96■□□□□ 0.63
PDLIM7-202ENST00000355841 NTHL1P78549 312 aa18.96■□□□□ 0.63
PDLIM7-202ENST00000355841 MTMR3Q13615 1198 aa18.96■□□□□ 0.63
PDLIM7-202ENST00000355841 SGO2Q562F6 1265 aa18.96■□□□□ 0.63
PDLIM7-202ENST00000355841 GRASPQ7Z6J2 395 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-202ENST00000355841 GPR149Q86SP6 731 aa18.96■□□□□ 0.63
PDLIM7-202ENST00000355841 FAM71AQ8IYT1 594 aa18.96■□□□□ 0.63
PDLIM7-202ENST00000355841 CMASQ8NFW8 434 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-202ENST00000355841 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-202ENST00000355841 SMARCD1Q96GM5 515 aa18.96■□□□□ 0.63
PDLIM7-202ENST00000355841 SMOQ99835 787 aa18.96■□□□□ 0.63
PDLIM7-202ENST00000355841 DNAI2Q9GZS0 605 aa18.96■□□□□ 0.63
PDLIM7-202ENST00000355841 HSFX1Q9UBD0 423 aa18.96■□□□□ 0.63
PDLIM7-202ENST00000355841 USP15Q9Y4E8 981 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-202ENST00000355841 VDRP11473 427 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 EPHB3P54753 998 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 MAP3K7CLP57077 242 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 JAM2P57087 298 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 GOLGA7BQ2TAP0 167 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 CES5AQ6NT32 575 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 VSTM1Q6UX27 236 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 CACNA2D4Q7Z3S7 1137 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 SLC47A2Q86VL8 602 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 HS6ST3Q8IZP7 471 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 SPAG5Q96R06 1193 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 CORO1BQ9BR76 489 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 TRIM5Q9C035 493 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 THEGQ9P2T0 379 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 DNMT3BQ9UBC3 853 aaKnown RBP18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 TSPAN16Q9UKR8 245 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 ATP8B3O60423 1300 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 O00370 1275 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 XYLBO75191 536 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 GFPT2O94808 682 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 CFHP08603 1231 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 FAM200BP0CF97 657 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 GNA15P30679 374 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 KCNQ1P51787 676 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 ITIH3Q06033 890 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 LEXMQ3ZCV2 418 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 ARHGAP17Q68EM7 881 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 DNAJB7Q7Z6W7 309 aaPredicted RBP18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 TTC30AQ86WT1 665 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 ZMIZ2Q8NF64 920 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 UBA3Q8TBC4 463 aa18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 MAGED2Q9UNF1 606 aaPredicted RBP18.95■□□□□ 0.62
PDLIM7-202ENST00000355841 THAP12O43422 761 aa18.94■□□□□ 0.62
PDLIM7-202ENST00000355841 CBFA2T2O43439 604 aa18.94■□□□□ 0.62
PDLIM7-202ENST00000355841 MBTPS2O43462 519 aa18.94■□□□□ 0.62
PDLIM7-202ENST00000355841 TPM3P06753 285 aa18.94■□□□□ 0.62
PDLIM7-202ENST00000355841 RPL10AP62906 217 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-202ENST00000355841 ARID5AQ03989 594 aa18.94■□□□□ 0.62
PDLIM7-202ENST00000355841 SARM1Q6SZW1 724 aa18.94■□□□□ 0.62
PDLIM7-202ENST00000355841 CLEC20AQ6ZU45 233 aa18.94■□□□□ 0.62
PDLIM7-202ENST00000355841 RTL10Q7L3V2 364 aa18.94■□□□□ 0.62
PDLIM7-202ENST00000355841 ELMOD1Q8N336 334 aa18.94■□□□□ 0.62
PDLIM7-202ENST00000355841 CPLX3Q8WVH0 158 aa18.94■□□□□ 0.62
PDLIM7-202ENST00000355841 ZNF512Q96ME7 567 aaPredicted RBP18.94■□□□□ 0.62
PDLIM7-202ENST00000355841 KIAA1257Q9ULG3 409 aa18.94■□□□□ 0.62
PDLIM7-202ENST00000355841 TULP2O00295 520 aa18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 NRG2O14511 850 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 TRIM66O15016 1216 aa18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 ANXA13P27216 316 aa18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 IFRD2Q12894 506 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 PLD1Q13393 1074 aa18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 SMAD4Q13485 552 aaKnown RBP18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 VEPH1Q14D04 833 aa18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 ATAT1Q5SQI0 421 aa18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 PTCRAQ6ISU1 281 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 ZNF606Q8WXB4 792 aa18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 BAP1Q92560 729 aa18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 DUSP16Q9BY84 665 aa18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 TTYH3Q9C0H2 523 aa18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 POMKQ9H5K3 350 aa18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 ZNF334Q9HCZ1 680 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 DMAP1Q9NPF5 467 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 VCANP13611 3396 aa18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 PTPRDP23468 1912 aa18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 DOCK6Q96HP0 2047 aa18.93■□□□□ 0.62
PDLIM7-202ENST00000355841 FAM170AA1A519 330 aa18.92■□□□□ 0.62
PDLIM7-202ENST00000355841 SLC38A8A6NNN8 435 aa18.92■□□□□ 0.62
PDLIM7-202ENST00000355841 M0QYV0 167 aa18.92■□□□□ 0.62
PDLIM7-202ENST00000355841 MICAL2O94851 1124 aa18.92■□□□□ 0.62
PDLIM7-202ENST00000355841 PAPLNO95428 1278 aa18.92■□□□□ 0.62
PDLIM7-202ENST00000355841 RHOP08100 348 aa18.92■□□□□ 0.62
PDLIM7-202ENST00000355841 NPR3P17342 541 aa18.92■□□□□ 0.62
PDLIM7-202ENST00000355841 SP100P23497 879 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-202ENST00000355841 SOX5P35711 763 aa18.92■□□□□ 0.62
PDLIM7-202ENST00000355841 USP46P62068 366 aa18.92■□□□□ 0.62
PDLIM7-202ENST00000355841 PTK2Q05397 1052 aa18.92■□□□□ 0.62
PDLIM7-202ENST00000355841 LCLAT1Q6UWP7 414 aa18.92■□□□□ 0.62
PDLIM7-202ENST00000355841 GPRIN1Q7Z2K8 1008 aa18.92■□□□□ 0.62
PDLIM7-202ENST00000355841 ANKRD52Q8NB46 1076 aa18.92■□□□□ 0.62
PDLIM7-202ENST00000355841 SUSD6Q92537 303 aa18.92■□□□□ 0.62
PDLIM7-202ENST00000355841 PSMG2Q969U7 264 aa18.92■□□□□ 0.62
PDLIM7-202ENST00000355841 C8orf48Q96LL4 319 aa18.92■□□□□ 0.62
PDLIM7-202ENST00000355841 CSNK1G1Q9HCP0 422 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms