RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 LRRC74AQ0VAA2 488 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 FAM102BQ5T8I3 360 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 ZPBP2Q6X784 338 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 TRIM72Q6ZMU5 477 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 ZNF354CQ86Y25 554 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 TAB3Q8N5C8 712 aaPredicted RBP8.55□□□□□ -1.04
COMMD9-202ENST00000355500 FBXL13Q8NEE6 735 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 NPLOC4Q8TAT6 608 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 TCP11Q8WWU5 503 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 CEP170P1Q96L14 293 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 CCDC114Q96M63 670 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 SH3GL2Q99962 352 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 HERC2P3Q9BVR0 1158 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 TRIM4Q9C037 500 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 NSRP1Q9H0G5 558 aaKnown RBP8.55□□□□□ -1.04
COMMD9-202ENST00000355500 XPNPEP1Q9NQW7 623 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 HECAQ9UBI9 543 aaPredicted RBP8.55□□□□□ -1.04
COMMD9-202ENST00000355500 NOCTQ9UK39 431 aaKnown RBP8.55□□□□□ -1.04
COMMD9-202ENST00000355500 AMFRQ9UKV5 643 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 PCDHB8Q9UN66 801 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 TFR2Q9UP52 801 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 CNTN6Q9UQ52 1028 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 DENND3A2RUS2 1198 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 DDX39AO00148 427 aaKnown RBP8.55□□□□□ -1.04
COMMD9-202ENST00000355500 DESP17661 470 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 ADSSP30520 456 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 EFNA5P52803 228 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 GALCP54803 685 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 PPP3CAQ08209 521 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 PDE1CQ14123 709 aaPredicted RBP8.55□□□□□ -1.04
COMMD9-202ENST00000355500 SURF1Q15526 300 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 HABP4Q5JVS0 413 aaKnown RBP8.55□□□□□ -1.04
COMMD9-202ENST00000355500 THOC7Q6I9Y2 204 aaKnown RBP8.55□□□□□ -1.04
COMMD9-202ENST00000355500 CRTC1Q6UUV9 634 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 PLPPR4Q7Z2D5 763 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 ZNF606Q8WXB4 792 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 ZKSCAN4Q969J2 545 aaPredicted RBP8.55□□□□□ -1.04
COMMD9-202ENST00000355500 NT5C1BQ96P26 610 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 CBWD1Q9BRT8 395 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 MRPL9Q9BYD2 267 aaKnown RBP8.55□□□□□ -1.04
COMMD9-202ENST00000355500 ZNF302Q9NR11 478 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 NRBP2Q9NSY0 501 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 MORF4L1Q9UBU8 362 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 KIAA1257Q9ULG3 409 aa8.55□□□□□ -1.04
COMMD9-202ENST00000355500 FAM170AA1A519 330 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 GOLGA8KD6RF30 607 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 ZNF185O15231 689 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 SLC16A4O15374 487 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 ATP9BO43861 1147 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 ADRB2P07550 413 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 GCKP35557 465 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 RXRGP48443 463 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 MNX1P50219 401 aaPredicted RBP8.54□□□□□ -1.04
COMMD9-202ENST00000355500 FCGRTP55899 365 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 C2orf54Q08AI8 447 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 EMC2Q15006 297 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 SLC39A4Q6P5W5 647 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 DLK2Q6UY11 383 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 LRRTM3Q86VH5 581 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 TBC1D21Q8IYX1 336 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 CD99L2Q8TCZ2 262 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 MAELQ96JY0 434 aaKnown RBP8.54□□□□□ -1.04
COMMD9-202ENST00000355500 CAPZA3Q96KX2 299 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 SRPK1Q96SB4 655 aaKnown RBP8.54□□□□□ -1.04
COMMD9-202ENST00000355500 PACSIN1Q9BY11 444 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 NFKBIZQ9BYH8 718 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 DKK3Q9UBP4 350 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 AGTPBP1Q9UPW5 1226 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 ZNFX1Q9P2E3 1918 aaKnown RBP8.54□□□□□ -1.04
COMMD9-202ENST00000355500 MYH10P35580 1976 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 ESYT3A0FGR9 886 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 ZNF233A6NK53 670 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 SRRM3A6NNA2 597 aaPredicted RBP8.54□□□□□ -1.04
COMMD9-202ENST00000355500 LRRIQ3A6PVS8 624 aaPredicted RBP8.54□□□□□ -1.04
COMMD9-202ENST00000355500 BTBD19C9JJ37 291 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 NDUFAB1O14561 156 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 BUB1O43683 1085 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 TRIM49P0CI25 452 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 TRIM49CP0CI26 452 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 SLC12A2P55011 1212 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 DRG2P55039 364 aaKnown RBP8.54□□□□□ -1.04
COMMD9-202ENST00000355500 SOX10P56693 466 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 GPC5P78333 572 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 CDR2Q01850 454 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 CACNB2Q08289 660 aaPredicted RBP8.54□□□□□ -1.04
COMMD9-202ENST00000355500 SERINC3Q13530 473 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 GPAT2Q6NUI2 795 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 MZT2AQ6P582 158 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 METTL7BQ6UX53 244 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 LRIG3Q6UXM1 1119 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 PEX26Q7Z412 305 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 CCDC60Q8IWA6 550 aaPredicted RBP8.54□□□□□ -1.04
COMMD9-202ENST00000355500 EPS8L1Q8TE68 723 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 U2AF1L4Q8WU68 220 aaKnown RBP8.54□□□□□ -1.04
COMMD9-202ENST00000355500 PSPC1Q8WXF1 523 aaKnown RBP8.54□□□□□ -1.04
COMMD9-202ENST00000355500 VPS50Q96JG6 964 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 VCPIP1Q96JH7 1222 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 WNT8AQ9H1J5 351 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 C2orf40Q9H1Z8 148 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 R3HDMLQ9H3Y0 253 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms