RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 MCM8Q9UJA3 840 aa20.52■□□□□ 0.88
COL13A1-201ENST00000354547 DCTN4Q9UJW0 460 aa20.52■□□□□ 0.88
COL13A1-201ENST00000354547 SHOC2Q9UQ13 582 aa20.52■□□□□ 0.88
COL13A1-201ENST00000354547 GBP2P32456 591 aaPredicted RBP20.52■□□□□ 0.88
COL13A1-201ENST00000354547 MSH2P43246 934 aa20.52■□□□□ 0.88
COL13A1-201ENST00000354547 GSCP56915 257 aaPredicted RBP20.52■□□□□ 0.88
COL13A1-201ENST00000354547 GEMIN4P57678 1058 aaKnown RBP20.52■□□□□ 0.88
COL13A1-201ENST00000354547 EIF3EP60228 445 aaKnown RBP20.52■□□□□ 0.88
COL13A1-201ENST00000354547 METTL7BQ6UX53 244 aa20.52■□□□□ 0.88
COL13A1-201ENST00000354547 PLCD4Q9BRC7 762 aa20.52■□□□□ 0.88
COL13A1-201ENST00000354547 ZNF518BQ9C0D4 1074 aa20.52■□□□□ 0.88
COL13A1-201ENST00000354547 XPO7Q9UIA9 1087 aaKnown RBP20.52■□□□□ 0.88
COL13A1-201ENST00000354547 RABGEF1Q9UJ41 708 aa20.52■□□□□ 0.88
COL13A1-201ENST00000354547 TMEM63AO94886 807 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 ITGB3P05106 788 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 MIPP30301 263 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 ARL4CP56559 192 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 NR1H3Q13133 447 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 VGLL4Q14135 290 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 ZNF268Q14587 947 aaPredicted RBP20.51■□□□□ 0.87
COL13A1-201ENST00000354547 LBX2Q6XYB7 198 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 PPIL6Q8IXY8 311 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 LRRC37BQ96QE4 947 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 PAFAH2Q99487 392 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 NPHS2Q9NP85 383 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 CHKBQ9Y259 395 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 SIGLEC16A6NMB1 481 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 M0QYV0 167 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 GCLCP48506 637 aaPredicted RBP20.51■□□□□ 0.87
COL13A1-201ENST00000354547 IRX3P78415 501 aaPredicted RBP20.51■□□□□ 0.87
COL13A1-201ENST00000354547 RNASELQ05823 741 aaKnown RBP20.51■□□□□ 0.87
COL13A1-201ENST00000354547 RNF43Q68DV7 783 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 MPZL3Q6UWV2 235 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 APOBEC3FQ8IUX4 373 aaKnown RBP20.51■□□□□ 0.87
COL13A1-201ENST00000354547 ASCC2Q9H1I8 757 aaPredicted RBP20.51■□□□□ 0.87
COL13A1-201ENST00000354547 STRIP2Q9ULQ0 834 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 ABLIM1O14639 778 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 ANP32DO95626 131 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 RBP3P10745 1247 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 RAD23BP54727 409 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 TAP1Q03518 808 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 FAM102AQ5T9C2 384 aaPredicted RBP20.51■□□□□ 0.87
COL13A1-201ENST00000354547 FBXO16Q8IX29 292 aaPredicted RBP20.51■□□□□ 0.87
COL13A1-201ENST00000354547 SPATA18Q8TC71 538 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 SPATA33Q96N06 139 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 WDR83Q9BRX9 315 aaKnown RBP20.51■□□□□ 0.87
COL13A1-201ENST00000354547 SPATC1LQ9H0A9 340 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 RPF1Q9H9Y2 349 aaKnown RBP20.51■□□□□ 0.87
COL13A1-201ENST00000354547 PCDHGC3Q9UN70 934 aa20.51■□□□□ 0.87
COL13A1-201ENST00000354547 AVILO75366 819 aa20.5■□□□□ 0.87
COL13A1-201ENST00000354547 ECM2O94769 699 aaPredicted RBP20.5■□□□□ 0.87
COL13A1-201ENST00000354547 KRT7P08729 469 aa20.5■□□□□ 0.87
COL13A1-201ENST00000354547 IQCF3P0C7M6 154 aa20.5■□□□□ 0.87
COL13A1-201ENST00000354547 MXD4Q14582 209 aaPredicted RBP20.5■□□□□ 0.87
COL13A1-201ENST00000354547 EFCAB12Q6NXP0 572 aa20.5■□□□□ 0.87
COL13A1-201ENST00000354547 C1orf228Q6PIY5 440 aa20.5■□□□□ 0.87
COL13A1-201ENST00000354547 HEXIM2Q96MH2 286 aaKnown RBP20.5■□□□□ 0.87
COL13A1-201ENST00000354547 ARHGEF3Q9NR81 526 aa20.5■□□□□ 0.87
COL13A1-201ENST00000354547 SIX4Q9UIU6 781 aa20.5■□□□□ 0.87
COL13A1-201ENST00000354547 ZBTB42B2RXF5 422 aa20.5■□□□□ 0.87
COL13A1-201ENST00000354547 XYLT1Q86Y38 959 aa20.5■□□□□ 0.87
COL13A1-201ENST00000354547 GRAMD1AQ96CP6 724 aa20.5■□□□□ 0.87
COL13A1-201ENST00000354547 SLC17A7Q9P2U7 560 aa20.5■□□□□ 0.87
COL13A1-201ENST00000354547 SMG5Q9UPR3 1016 aaKnown RBP20.5■□□□□ 0.87
COL13A1-201ENST00000354547 FARP1Q9Y4F1 1045 aaPredicted RBP20.5■□□□□ 0.87
COL13A1-201ENST00000354547 LCTP09848 1927 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 PRPF4O43172 522 aaKnown RBP eCLIP20.49■□□□□ 0.87
COL13A1-201ENST00000354547 RNF8O76064 485 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 CBX6O95503 412 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 PDK4Q16654 411 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 C15orf59Q2T9L4 293 aaPredicted RBP20.49■□□□□ 0.87
COL13A1-201ENST00000354547 DARS2Q6PI48 645 aaKnown RBP20.49■□□□□ 0.87
COL13A1-201ENST00000354547 IGDCC3Q8IVU1 814 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 C1orf127Q8N9H9 656 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 ATP11CQ8NB49 1132 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 NSMCE1Q8WV22 266 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 ZNF75CPQ92670 426 aaPredicted RBP20.49■□□□□ 0.87
COL13A1-201ENST00000354547 CPB2Q96IY4 423 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 GPR20Q99678 358 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 CXorf56Q9H5V9 222 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 UBN1Q9NPG3 1134 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 LACTBL1A8MY62 500 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 UNC5CO95185 931 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 NEFHP12036 1026 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 FAXCQ5TGI0 409 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 SCYL2Q6P3W7 929 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 OTOAQ7RTW8 1153 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 TDRPQ86YL5 185 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 NIPA2Q8N8Q9 360 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 KCNV2Q8TDN2 545 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 TCP10LQ8TDR4 215 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 ELOVL4Q9GZR5 314 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 CDT1Q9H211 546 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 STARD13Q9Y3M8 1113 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 SNCAIPQ9Y6H5 919 aa20.49■□□□□ 0.87
COL13A1-201ENST00000354547 GPR25O00155 361 aa20.48■□□□□ 0.87
COL13A1-201ENST00000354547 TYROBPO43914 113 aa20.48■□□□□ 0.87
COL13A1-201ENST00000354547 EDF1O60869 148 aaKnown RBP20.48■□□□□ 0.87
COL13A1-201ENST00000354547 USP2O75604 605 aaPredicted RBP20.48■□□□□ 0.87
COL13A1-201ENST00000354547 MICAL2O94851 1124 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms