RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 SSC5DA1L4H1 1573 aa25.71■■□□□ 1.71
CPNE1-202ENST00000352393 SMAPO00193 183 aa25.7■■□□□ 1.71
CPNE1-202ENST00000352393 SMNDC1O75940 238 aaKnown RBP eCLIP25.7■■□□□ 1.711e-15■■■■□ 21.1
CPNE1-202ENST00000352393 EGFRP00533 1210 aa25.7■■□□□ 1.71
CPNE1-202ENST00000352393 KDELR1P24390 212 aa25.7■■□□□ 1.71
CPNE1-202ENST00000352393 RXRBP28702 533 aa25.7■■□□□ 1.71
CPNE1-202ENST00000352393 ASPAP45381 313 aa25.7■■□□□ 1.71
CPNE1-202ENST00000352393 BLMHQ13867 455 aa25.7■■□□□ 1.71
CPNE1-202ENST00000352393 TARBP2Q15633 366 aaKnown RBP25.7■■□□□ 1.71
CPNE1-202ENST00000352393 CIAPIN1Q6FI81 312 aa25.7■■□□□ 1.71
CPNE1-202ENST00000352393 THNSL1Q8IYQ7 743 aa25.7■■□□□ 1.71
CPNE1-202ENST00000352393 RSAD2Q8WXG1 361 aa25.7■■□□□ 1.71
CPNE1-202ENST00000352393 NAF1Q96HR8 494 aaKnown RBP25.7■■□□□ 1.71
CPNE1-202ENST00000352393 NUDCD1Q96RS6 583 aa25.7■■□□□ 1.71
CPNE1-202ENST00000352393 ITGBL1O95965 494 aaPredicted RBP25.7■■□□□ 1.7
CPNE1-202ENST00000352393 WEE2P0C1S8 567 aa25.7■■□□□ 1.7
CPNE1-202ENST00000352393 ABL2P42684 1182 aa25.7■■□□□ 1.7
CPNE1-202ENST00000352393 SEPT7Q16181 437 aaKnown RBP25.7■■□□□ 1.7
CPNE1-202ENST00000352393 KCNT1Q5JUK3 1230 aa25.7■■□□□ 1.7
CPNE1-202ENST00000352393 TEX13BQ9BXU2 312 aa25.7■■□□□ 1.7
CPNE1-202ENST00000352393 TJP2Q9UDY2 1190 aa25.7■■□□□ 1.7
CPNE1-202ENST00000352393 ANK1P16157 1881 aa25.7■■□□□ 1.7
CPNE1-202ENST00000352393 WDR91A4D1P6 747 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 KRT3P12035 628 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 RAD23BP54727 409 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 SMYD5Q6GMV2 418 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 SCARA5Q6ZMJ2 495 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 ZBTB33Q86T24 672 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 UNC45BQ8IWX7 931 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 KIAA0319LQ8IZA0 1049 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 PTPRN2Q92932 1015 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 MIPEPQ99797 713 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 C12orf65Q9H3J6 166 aaKnown RBP25.69■■□□□ 1.7
CPNE1-202ENST00000352393 DENND2DQ9H6A0 471 aaPredicted RBP25.69■■□□□ 1.7
CPNE1-202ENST00000352393 CYTH4Q9UIA0 394 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 XPO7Q9UIA9 1087 aaKnown RBP25.69■■□□□ 1.7
CPNE1-202ENST00000352393 MSCO60682 206 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 TOM1L1O75674 476 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 DHRS4L1P0CG22 281 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 CDC25CP30307 473 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 HADHQ16836 314 aaKnown RBP25.69■■□□□ 1.7
CPNE1-202ENST00000352393 BBS9Q3SYG4 887 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 CMPK2Q5EBM0 449 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 PDIK1LQ8N165 341 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 C12orf42Q96LP6 360 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 KLF6Q99612 283 aaPredicted RBP25.69■■□□□ 1.7
CPNE1-202ENST00000352393 MANSC1Q9H8J5 431 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 DCTN4Q9UJW0 460 aa25.69■■□□□ 1.7
CPNE1-202ENST00000352393 GOLGA8RI6L899 631 aa25.68■■□□□ 1.7
CPNE1-202ENST00000352393 CD48P09326 243 aa25.68■■□□□ 1.7
CPNE1-202ENST00000352393 POLR2BP30876 1174 aaKnown RBP25.68■■□□□ 1.7
CPNE1-202ENST00000352393 OVGP1Q12889 678 aa25.68■■□□□ 1.7
CPNE1-202ENST00000352393 DUOXA2Q1HG44 320 aa25.68■■□□□ 1.7
CPNE1-202ENST00000352393 CHSY1Q86X52 802 aa25.68■■□□□ 1.7
CPNE1-202ENST00000352393 PALM2Q8IXS6 379 aa25.68■■□□□ 1.7
CPNE1-202ENST00000352393 SCYL3Q8IZE3 742 aa25.68■■□□□ 1.7
CPNE1-202ENST00000352393 ZNF280CQ8ND82 737 aa25.68■■□□□ 1.7
CPNE1-202ENST00000352393 TTC8Q8TAM2 541 aa25.68■■□□□ 1.7
CPNE1-202ENST00000352393 PCYT2Q99447 389 aa25.68■■□□□ 1.7
CPNE1-202ENST00000352393 MRPL4Q9BYD3 311 aaKnown RBP25.68■■□□□ 1.7
CPNE1-202ENST00000352393 XYLT2Q9H1B5 865 aa25.68■■□□□ 1.7
CPNE1-202ENST00000352393 MGAMO43451 1857 aa25.68■■□□□ 1.7
CPNE1-202ENST00000352393 MARK3P27448 753 aa25.67■■□□□ 1.7
CPNE1-202ENST00000352393 NEK3P51956 506 aa25.67■■□□□ 1.7
CPNE1-202ENST00000352393 YWHAEP62258 255 aaKnown RBP25.67■■□□□ 1.7
CPNE1-202ENST00000352393 ZNF699Q32M78 642 aa25.67■■□□□ 1.7
CPNE1-202ENST00000352393 TAB3Q8N5C8 712 aaPredicted RBP25.67■■□□□ 1.7
CPNE1-202ENST00000352393 LHX5Q9H2C1 402 aa25.67■■□□□ 1.7
CPNE1-202ENST00000352393 APOC4-APOC2K7ER74 178 aa25.67■■□□□ 1.7
CPNE1-202ENST00000352393 ABLIM1O14639 778 aa25.67■■□□□ 1.7
CPNE1-202ENST00000352393 OGTO15294 1046 aa25.67■■□□□ 1.7
CPNE1-202ENST00000352393 APOC2P02655 101 aa25.67■■□□□ 1.7
CPNE1-202ENST00000352393 TRPC3Q13507 836 aa25.67■■□□□ 1.7
CPNE1-202ENST00000352393 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.67■■□□□ 1.74e-6■■■□□ 17.2
CPNE1-202ENST00000352393 PTCD3Q96EY7 689 aaKnown RBP25.67■■□□□ 1.7
CPNE1-202ENST00000352393 CYTH2Q99418 400 aa25.67■■□□□ 1.7
CPNE1-202ENST00000352393 AS3MTQ9HBK9 375 aa25.67■■□□□ 1.7
CPNE1-202ENST00000352393 STK32BQ9NY57 414 aa25.67■■□□□ 1.7
CPNE1-202ENST00000352393 CPSF3Q9UKF6 684 aaKnown RBP25.67■■□□□ 1.7
CPNE1-202ENST00000352393 HOXC6P09630 235 aa25.66■■□□□ 1.7
CPNE1-202ENST00000352393 ETV4P43268 484 aa25.66■■□□□ 1.7
CPNE1-202ENST00000352393 HMGCS2P54868 508 aa25.66■■□□□ 1.7
CPNE1-202ENST00000352393 ZNF280AP59817 542 aaPredicted RBP25.66■■□□□ 1.7
CPNE1-202ENST00000352393 MTM1Q13496 603 aa25.66■■□□□ 1.7
CPNE1-202ENST00000352393 STXBP2Q15833 593 aa25.66■■□□□ 1.7
CPNE1-202ENST00000352393 APOPT1Q96IL0 206 aa25.66■■□□□ 1.7
CPNE1-202ENST00000352393 TSSK1BQ9BXA7 367 aa25.66■■□□□ 1.7
CPNE1-202ENST00000352393 TRIM55Q9BYV6 548 aa25.66■■□□□ 1.7
CPNE1-202ENST00000352393 CHMP2BQ9UQN3 213 aa25.66■■□□□ 1.7
CPNE1-202ENST00000352393 HAUS5O94927 633 aa25.66■■□□□ 1.7
CPNE1-202ENST00000352393 KCNA3P22001 575 aa25.66■■□□□ 1.7
CPNE1-202ENST00000352393 EFNA5P52803 228 aa25.66■■□□□ 1.7
CPNE1-202ENST00000352393 EIF3EP60228 445 aaKnown RBP25.66■■□□□ 1.7
CPNE1-202ENST00000352393 PSMC1P62191 440 aaKnown RBP25.66■■□□□ 1.7
CPNE1-202ENST00000352393 SURF1Q15526 300 aa25.66■■□□□ 1.7
CPNE1-202ENST00000352393 IGDCC3Q8IVU1 814 aa25.66■■□□□ 1.7
CPNE1-202ENST00000352393 FAM71DQ8N9W8 422 aa25.66■■□□□ 1.7
CPNE1-202ENST00000352393 ACO2Q99798 780 aaKnown RBP25.66■■□□□ 1.7
CPNE1-202ENST00000352393 MAF1Q9H063 256 aa25.66■■□□□ 1.7
CPNE1-202ENST00000352393 CORO1CQ9ULV4 474 aaPredicted RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms