RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 A0A1W2PPH5 198 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 A0A1W2PQH9 124 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 A0A1W2PR64 198 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 SMCO3A2RU48 225 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 ATP2A1O14983 1001 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 GUCA1CO95843 209 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 ATP1A3P13637 1013 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 HTR1BP28222 390 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 RRADP55042 308 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 MRPL58Q14197 206 aaKnown RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 CSHL1Q14406 222 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 GLE1Q53GS7 698 aaKnown RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 KCNIP4Q6PIL6 250 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 KCNT2Q6UVM3 1135 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 RNF180Q86T96 592 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 DIS3L2Q8IYB7 885 aaKnown RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 ELOA2Q8IYF1 753 aaPredicted RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 OR8K1Q8NGG5 319 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 PPP1R35Q8TAP8 253 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 ETNPPLQ8TBG4 499 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 KCTD10Q9H3F6 313 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 SLC32A1Q9H598 525 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 RNF14Q9UBS8 474 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 POGZQ7Z3K3 1410 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 hCG_1807616A0A1W2PRN6 198 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 ZNF785A8K8V0 405 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 A8MUI8 341 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 ITGALP20701 1170 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 FBLN1P23142 703 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 MTIF2P46199 727 aaKnown RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 AFF3P51826 1226 aaKnown RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 NR0B1P51843 470 aaKnown RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 OASLQ15646 514 aaKnown RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.25□□□□□ -1.41
RFC1-201ENST00000349703 CFAP221Q4G0U5 840 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 C3orf38Q5JPI3 329 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 GPR158Q5T848 1215 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 GTF2IRD2BQ6EKJ0 949 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 PHLDB3Q6NSJ2 640 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 MILR1Q7Z6M3 343 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 GTF2IRD2Q86UP8 949 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 GBP7Q8N8V2 638 aaPredicted RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 C3orf20Q8ND61 904 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 MVB12AQ96EY5 273 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 SUCLG2Q96I99 432 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 A1CFQ9NQ94 594 aaKnown RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 TRMT13Q9NUP7 481 aaKnown RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 SIRT5Q9NXA8 310 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 PA2G4Q9UQ80 394 aaKnown RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 KDRP35968 1356 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 ENC1O14682 589 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 PPP1R2P9O14990 202 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 GABBR2O75899 941 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 PDIA3P30101 505 aaKnown RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 ARL1P40616 181 aaPredicted RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 STAT1P42224 750 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 RBL2Q08999 1139 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 SMU1Q2TAY7 513 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 ZCCHC8Q6NZY4 707 aaKnown RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 ZNF530Q6P9A1 599 aaPredicted RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 EIF3MQ7L2H7 374 aaKnown RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 SRRM1Q8IYB3 904 aaKnown RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 GLB1L3Q8NCI6 653 aaPredicted RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 TBC1D15Q8TC07 691 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 EAF2Q96CJ1 260 aaPredicted RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 VPS39Q96JC1 886 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 VCXQ9H320 206 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 OPA3Q9H6K4 179 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 UBE2TQ9NPD8 197 aaPredicted RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 TRPC5Q9UL62 973 aaPredicted RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 GPR45Q9Y5Y3 372 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 EPN1Q9Y6I3 576 aaPredicted RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 ANKRD26Q9UPS8 1709 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 E7EWF7 191 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 AUHQ13825 339 aaKnown RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 TRIP4Q15650 581 aaPredicted RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 PRSS53Q2L4Q9 553 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 ANKRD20A4Q4UJ75 823 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 ANKRD20A8PQ5CZ79 823 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 ANKRD20A2Q5SQ80 823 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 ANKRD20A1Q5TYW2 823 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 SFMBT2Q5VUG0 894 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 ANKRD20A3Q5VUR7 823 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 HLA-DQA1Q5Y7H0 255 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 MAMDC2Q7Z304 686 aaPredicted RBP6.25□□□□□ -1.41
RFC1-201ENST00000349703 ZNF227Q86WZ6 799 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 TUSC5Q8IXB3 177 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 KBTBD3Q8NAB2 608 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 UBAC1Q9BSL1 405 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 CEP41Q9BYV8 373 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 TOR3AQ9H497 397 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 TUBE1Q9UJT0 475 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 CTNND2Q9UQB3 1225 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 KIF20BQ96Q89 1820 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 PRICKLE3O43900 615 aaPredicted RBP6.24□□□□□ -1.41
RFC1-201ENST00000349703 IRAK1P51617 712 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 HK2P52789 917 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 DRG2P55039 364 aaKnown RBP6.24□□□□□ -1.41
RFC1-201ENST00000349703 NPEPPSP55786 919 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 GPS1Q13098 491 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms