RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 H0Y3Z8 333 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 TOM1L1O75674 476 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 UPP2O95045 317 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 LSM8O95777 96 aaKnown RBP18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 ATP2A2P16615 1042 aaKnown RBP18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 PAX7P23759 505 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 RGS9BPQ6ZS82 235 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 ZC3H18Q86VM9 953 aaKnown RBP18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 CCDC125Q86Z20 511 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 PALM2Q8IXS6 379 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 TRAPPC12Q8WVT3 735 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 TWNKQ96RR1 684 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 TMEM134Q9H6X4 195 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 METTL5Q9NRN9 209 aaKnown RBP18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 SLC5A4Q9NY91 659 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 DDX56Q9NY93 547 aaKnown RBP18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 XPO7Q9UIA9 1087 aaKnown RBP18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 ENTPD5O75356 428 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 MAP3K6O95382 1288 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 ERBB2P04626 1255 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 HOXC6P09630 235 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 EIF4BP23588 611 aaKnown RBP18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 GCLCP48506 637 aaPredicted RBP18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 ARL4CP56559 192 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 CEP128Q6ZU80 1094 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 RFX6Q8HWS3 928 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 MZB1Q8WU39 189 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 DCAKDQ8WVC6 231 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 CALN1Q9BXU9 219 aa18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 MYH9P35579 1960 aaKnown RBP18.97■□□□□ 0.63
PTP4A3-202ENST00000349124 FARP2O94887 1054 aaPredicted RBP18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 ZNF280AP59817 542 aaPredicted RBP18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 EEF1DP3Q658K8 133 aa18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 ADGRD1Q6QNK2 874 aa18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 KCTD6Q8NC69 237 aa18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 SDCBP2Q9H190 292 aa18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 PSME4Q14997 1843 aa18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 IGKV6D-21A0A0A0MT36 114 aa18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 A0A0G2JND7 137 aa18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 A0A1B0GUA9 196 aa18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 FAM155BO75949 473 aa18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 TCF7P36402 384 aaPredicted RBP18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 LAMTOR4Q0VGL1 99 aa18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 BZW1Q7L1Q6 419 aaKnown RBP18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 NIPA2Q8N8Q9 360 aa18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 SERAC1Q96JX3 654 aa18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 FAM167BQ9BTA0 163 aa18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 KCNG1Q9UIX4 513 aa18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 CPSF3Q9UKF6 684 aaKnown RBP18.96■□□□□ 0.63
PTP4A3-202ENST00000349124 SIGLEC16A6NMB1 481 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 ABLIM1O14639 778 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 PEX11AO75192 247 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 MIPP30301 263 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 ALDH3A1P30838 453 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 SLC18A1P54219 525 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 SEPT7Q16181 437 aaKnown RBP18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 BBS12Q6ZW61 710 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 ATP11CQ8NB49 1132 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 MRPL4Q9BYD3 311 aaKnown RBP18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 NRBP2Q9NSY0 501 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 SENP1Q9P0U3 644 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 OGTO15294 1046 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 PRKCBP05771 671 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 ABCD1P33897 745 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 PTPN7P35236 360 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 ELK3P41970 407 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 OAZ1P54368 228 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 EIF3EP60228 445 aaKnown RBP18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 BANPQ8N9N5 519 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 ASCC2Q9H1I8 757 aaPredicted RBP18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 ACSS3Q9H6R3 686 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 SYNCQ9H7C4 482 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 ZFP69BQ9UJL9 534 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 ARID2Q68CP9 1835 aa18.95■□□□□ 0.62
PTP4A3-202ENST00000349124 RBP3P10745 1247 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 CDH5P33151 784 aaPredicted RBP18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 RFWD3Q6PCD5 774 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 ZPBP2Q6X784 338 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 AGGF1Q8N302 714 aaeCLIP18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 RAB3IPQ96QF0 476 aaPredicted RBP18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 MIPEPQ99797 713 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 PCDHGC3Q9UN70 934 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 MAFO75444 373 aaPredicted RBP18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 DCTN3O75935 186 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 FAAP100Q0VG06 881 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 DPYSL3Q14195 570 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 PRPF39Q86UA1 669 aaKnown RBP18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 XYLT1Q86Y38 959 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 UBA3Q8TBC4 463 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 SPATA18Q8TC71 538 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 PEBP4Q96S96 227 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 PPP1R16BQ96T49 567 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 DHRS4Q9BTZ2 278 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 ZNF518BQ9C0D4 1074 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 DENND2DQ9H6A0 471 aaPredicted RBP18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 SMYD3Q9H7B4 428 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 AS3MTQ9HBK9 375 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 FBXO6Q9NRD1 293 aaPredicted RBP18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 COL11A1P12107 1806 aaPredicted RBP18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 GRAP2O75791 330 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms