RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 ANKRD23Q86SG2 305 aa15.85■□□□□ 0.13
PTBP1-201ENST00000349038 FBXO36Q8NEA4 188 aa15.85■□□□□ 0.13
PTBP1-201ENST00000349038 DAGLAQ9Y4D2 1042 aa15.85■□□□□ 0.13
PTBP1-201ENST00000349038 NOP56O00567 594 aaKnown RBP15.84■□□□□ 0.13
PTBP1-201ENST00000349038 GAP43P17677 238 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 MLH1P40692 756 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 FAAP100Q0VG06 881 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 SLC15A2Q16348 729 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 HIF1AQ16665 826 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 ZNF394Q53GI3 561 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 C6orf52Q5T4I8 152 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 FAXCQ5TGI0 409 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 POMGNT1Q8WZA1 660 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 TEKT1Q969V4 418 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 TTC25Q96NG3 672 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 EIF2AK1Q9BQI3 630 aaKnown RBP15.84■□□□□ 0.13
PTBP1-201ENST00000349038 MTO1Q9Y2Z2 717 aaKnown RBP15.84■□□□□ 0.13
PTBP1-201ENST00000349038 FSCN2O14926 492 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 AVILO75366 819 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 LYPLA1O75608 230 aaPredicted RBP15.84■□□□□ 0.13
PTBP1-201ENST00000349038 KRT1P04264 644 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 CDK4P11802 303 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 VAMP7P51809 220 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 CHN2P52757 468 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 NCKAP1LP55160 1127 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 PTK7Q13308 1070 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 KCNT1Q5JUK3 1230 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 RC3H1Q5TC82 1133 aaKnown RBP15.84■□□□□ 0.13
PTBP1-201ENST00000349038 KLHL35Q6PF15 583 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 ZNF554Q86TJ5 538 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 NLRX1Q86UT6 975 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 SESTD1Q86VW0 696 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 DEFB107AQ8IZN7 70 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 DGCR14Q96DF8 476 aaKnown RBP15.84■□□□□ 0.13
PTBP1-201ENST00000349038 KIFC3Q9BVG8 833 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 LGALS13Q9UHV8 139 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 VAV3Q9UKW4 847 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 AGTPBP1Q9UPW5 1226 aa15.84■□□□□ 0.13
PTBP1-201ENST00000349038 COPEO14579 308 aa15.83■□□□□ 0.13
PTBP1-201ENST00000349038 CFBP00751 764 aa15.83■□□□□ 0.13
PTBP1-201ENST00000349038 PDGFRBP09619 1106 aa15.83■□□□□ 0.13
PTBP1-201ENST00000349038 UQCRBP14927 111 aa15.83■□□□□ 0.13
PTBP1-201ENST00000349038 RPL10P27635 214 aaKnown RBP15.83■□□□□ 0.13
PTBP1-201ENST00000349038 SHMT1P34896 483 aa15.83■□□□□ 0.13
PTBP1-201ENST00000349038 GEMIN4P57678 1058 aaKnown RBP15.83■□□□□ 0.13
PTBP1-201ENST00000349038 FMO1Q01740 532 aa15.83■□□□□ 0.13
PTBP1-201ENST00000349038 C6orf183Q5T699 404 aa15.83■□□□□ 0.13
PTBP1-201ENST00000349038 ANKRD22Q5VYY1 191 aa15.83■□□□□ 0.13
PTBP1-201ENST00000349038 AZIN2Q96A70 460 aa15.83■□□□□ 0.13
PTBP1-201ENST00000349038 TRIM56Q9BRZ2 755 aaKnown RBP15.83■□□□□ 0.13
PTBP1-201ENST00000349038 DTNAQ9Y4J8 743 aa15.83■□□□□ 0.13
PTBP1-201ENST00000349038 MROH7Q68CQ1 1323 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 FAM86B1E9PN63 330 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 FAM86B2P0C5J1 330 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 CYP11B1P15538 503 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 ALOX15P16050 662 aaPredicted RBP15.83■□□□□ 0.12
PTBP1-201ENST00000349038 BST1Q10588 318 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 DCTN2Q13561 401 aaKnown RBP15.83■□□□□ 0.12
PTBP1-201ENST00000349038 MSS51Q4VC12 460 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 EFHC1Q5JVL4 640 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 CPNE9Q8IYJ1 553 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 CCDC33Q8N5R6 958 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 POLR3CQ9BUI4 534 aaPredicted RBP15.83■□□□□ 0.12
PTBP1-201ENST00000349038 CAAP1Q9H8G2 361 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 USP29Q9HBJ7 922 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 MAN1C1Q9NR34 630 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 DMAC2Q9NW81 257 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 GREB1LQ9C091 1923 aaPredicted RBP15.83■□□□□ 0.12
PTBP1-201ENST00000349038 TRAFD1O14545 582 aaPredicted RBP15.83■□□□□ 0.12
PTBP1-201ENST00000349038 TYROBPO43914 113 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 SEC24DO94855 1032 aaPredicted RBP15.83■□□□□ 0.12
PTBP1-201ENST00000349038 SRGAP2CP0DJJ0 459 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 SRGAP2BP0DMP2 458 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 FGFR3P22607 806 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 OASLQ15646 514 aaKnown RBP15.83■□□□□ 0.12
PTBP1-201ENST00000349038 MYLK3Q32MK0 819 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 ANKDD1AQ495B1 522 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 VWA5B1Q5TIE3 1220 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 OLFML1Q6UWY5 402 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 TMIGD2Q96BF3 282 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 SERAC1Q96JX3 654 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 FAM20AQ96MK3 541 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 HAPLN3Q96S86 360 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 KCNK13Q9HB14 408 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 DDX4Q9NQI0 724 aaKnown RBP15.83■□□□□ 0.12
PTBP1-201ENST00000349038 CLEC11AQ9Y240 323 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 TSC22D4Q9Y3Q8 395 aa15.83■□□□□ 0.12
PTBP1-201ENST00000349038 LSM1O15116 133 aaKnown RBP15.82■□□□□ 0.12
PTBP1-201ENST00000349038 UFL1O94874 794 aa15.82■□□□□ 0.12
PTBP1-201ENST00000349038 PABPC4LP0CB38 370 aaKnown RBP15.82■□□□□ 0.12
PTBP1-201ENST00000349038 MUTP22033 750 aa15.82■□□□□ 0.12
PTBP1-201ENST00000349038 RGS2P41220 211 aa15.82■□□□□ 0.12
PTBP1-201ENST00000349038 PRAMEP78395 509 aa15.82■□□□□ 0.12
PTBP1-201ENST00000349038 TCP10Q12799 353 aa15.82■□□□□ 0.12
PTBP1-201ENST00000349038 TRMT5Q32P41 509 aaKnown RBP15.82■□□□□ 0.12
PTBP1-201ENST00000349038 CDHR3Q6ZTQ4 885 aa15.82■□□□□ 0.12
PTBP1-201ENST00000349038 ACAD11Q709F0 780 aa15.82■□□□□ 0.12
PTBP1-201ENST00000349038 RAVER1Q8IY67 606 aaKnown RBP15.82■□□□□ 0.12
PTBP1-201ENST00000349038 GIPC3Q8TF64 312 aa15.82■□□□□ 0.12
PTBP1-201ENST00000349038 BRD8Q9H0E9 1235 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms