RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 MARCKSL1P49006 195 aa19.68■□□□□ 0.74
PTN-201ENST00000348225 RGS7P49802 495 aa19.68■□□□□ 0.74
PTN-201ENST00000348225 RNASE9P60153 205 aaKnown RBP19.68■□□□□ 0.74
PTN-201ENST00000348225 MDH1BQ5I0G3 518 aa19.68■□□□□ 0.74
PTN-201ENST00000348225 FAM102AQ5T9C2 384 aaPredicted RBP19.68■□□□□ 0.74
PTN-201ENST00000348225 OR6B2Q6IFH4 312 aa19.68■□□□□ 0.74
PTN-201ENST00000348225 PMF1Q6P1K2 205 aa19.68■□□□□ 0.74
PTN-201ENST00000348225 TMEM110Q86TL2 294 aa19.68■□□□□ 0.74
PTN-201ENST00000348225 ZNF280BQ86YH2 543 aa19.68■□□□□ 0.74
PTN-201ENST00000348225 CPNE8Q86YQ8 564 aa19.68■□□□□ 0.74
PTN-201ENST00000348225 NPAS4Q8IUM7 802 aa19.68■□□□□ 0.74
PTN-201ENST00000348225 HASPINQ8TF76 798 aa19.68■□□□□ 0.74
PTN-201ENST00000348225 PAWRQ96IZ0 340 aaKnown RBP19.68■□□□□ 0.74
PTN-201ENST00000348225 MED10Q9BTT4 135 aa19.68■□□□□ 0.74
PTN-201ENST00000348225 MRPL9Q9BYD2 267 aaKnown RBP19.68■□□□□ 0.74
PTN-201ENST00000348225 PCDHB8Q9UN66 801 aa19.68■□□□□ 0.74
PTN-201ENST00000348225 USTQ9Y2C2 406 aa19.68■□□□□ 0.74
PTN-201ENST00000348225 I3L4J1 428 aa19.67■□□□□ 0.74
PTN-201ENST00000348225 XPO1O14980 1071 aaKnown RBP19.67■□□□□ 0.74
PTN-201ENST00000348225 ATP2C2O75185 946 aa19.67■□□□□ 0.74
PTN-201ENST00000348225 OR1G1P47890 313 aa19.67■□□□□ 0.74
PTN-201ENST00000348225 PLCB3Q01970 1234 aa19.67■□□□□ 0.74
PTN-201ENST00000348225 FAM183BPQ6ZVS7 135 aa19.67■□□□□ 0.74
PTN-201ENST00000348225 DEFB128Q7Z7B8 93 aa19.67■□□□□ 0.74
PTN-201ENST00000348225 FUKQ8N0W3 1084 aa19.67■□□□□ 0.74
PTN-201ENST00000348225 THEM5Q8N1Q8 247 aa19.67■□□□□ 0.74
PTN-201ENST00000348225 HSFY1Q96LI6 401 aa19.67■□□□□ 0.74
PTN-201ENST00000348225 ACBD6Q9BR61 282 aa19.67■□□□□ 0.74
PTN-201ENST00000348225 TMEM106CQ9BVX2 250 aa19.67■□□□□ 0.74
PTN-201ENST00000348225 DUSP16Q9BY84 665 aa19.67■□□□□ 0.74
PTN-201ENST00000348225 RBM12Q9NTZ6 932 aaKnown RBP19.67■□□□□ 0.74
PTN-201ENST00000348225 TET1Q8NFU7 2136 aa19.67■□□□□ 0.74
PTN-201ENST00000348225 TTC3P53804 2025 aa19.67■□□□□ 0.74
PTN-201ENST00000348225 TRAPPC3O43617 180 aa19.66■□□□□ 0.74
PTN-201ENST00000348225 FGGP02679 453 aa19.66■□□□□ 0.74
PTN-201ENST00000348225 TUBBP07437 444 aa19.66■□□□□ 0.74
PTN-201ENST00000348225 RHOXF2BP0C7M4 288 aa19.66■□□□□ 0.74
PTN-201ENST00000348225 HSPA1AP0DMV8 641 aaKnown RBP19.66■□□□□ 0.74
PTN-201ENST00000348225 HSPA1BP0DMV9 641 aaKnown RBP19.66■□□□□ 0.74
PTN-201ENST00000348225 PSMA2P25787 234 aa19.66■□□□□ 0.74
PTN-201ENST00000348225 TKTP29401 623 aaKnown RBP19.66■□□□□ 0.74
PTN-201ENST00000348225 RFC1P35251 1148 aaPredicted RBP19.66■□□□□ 0.74
PTN-201ENST00000348225 SSR1P43307 286 aaKnown RBP19.66■□□□□ 0.74
PTN-201ENST00000348225 PLA2G4AP47712 749 aa19.66■□□□□ 0.74
PTN-201ENST00000348225 ZNF211Q13398 564 aaPredicted RBP19.66■□□□□ 0.74
PTN-201ENST00000348225 LONRF2Q1L5Z9 754 aa19.66■□□□□ 0.74
PTN-201ENST00000348225 TCTN1Q2MV58 587 aa19.66■□□□□ 0.74
PTN-201ENST00000348225 CNKSR3Q6P9H4 555 aa19.66■□□□□ 0.74
PTN-201ENST00000348225 NECAB2Q7Z6G3 386 aa19.66■□□□□ 0.74
PTN-201ENST00000348225 RHOXF2Q9BQY4 288 aa19.66■□□□□ 0.74
PTN-201ENST00000348225 CRTAC1Q9NQ79 661 aa19.66■□□□□ 0.74
PTN-201ENST00000348225 ARGLU1Q9NWB6 273 aaPredicted RBP19.66■□□□□ 0.74
PTN-201ENST00000348225 MICAL3Q7RTP6 2002 aa19.66■□□□□ 0.74
PTN-201ENST00000348225 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.65■□□□□ 0.74
PTN-201ENST00000348225 CCDC188H7C350 402 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 TULP2O00295 520 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 KRIT1O00522 736 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 FAM200BP0CF97 657 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 NPR3P17342 541 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 RPL34P49207 117 aaKnown RBP19.65■□□□□ 0.74
PTN-201ENST00000348225 OGDHQ02218 1023 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 ZNF252P-AS1Q0IIN9 211 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 IKBKEQ14164 716 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 OVOS1Q6IE37 1185 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 JOSD2Q8TAC2 188 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 MYCBPAPQ8TBZ2 947 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 CASD1Q96PB1 797 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 TMEM59LQ9UK28 342 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 GOLGA6L10A0A0M3HER8 536 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 TARSL2A2RTX5 802 aaKnown RBP19.65■□□□□ 0.74
PTN-201ENST00000348225 PIK3R2O00459 728 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 B4GALT3O60512 393 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 ITGB1P05556 798 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 SCNN1AP37088 669 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 SLC6A3Q01959 620 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 ACAP1Q15027 740 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 INTS6LQ5JSJ4 861 aaKnown RBP19.65■□□□□ 0.74
PTN-201ENST00000348225 LRRC38Q5VT99 294 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 KIAA0319Q5VV43 1072 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 CC2D1AQ6P1N0 951 aaPredicted RBP19.65■□□□□ 0.74
PTN-201ENST00000348225 ANKZF1Q9H8Y5 726 aa19.65■□□□□ 0.74
PTN-201ENST00000348225 PYGMP11217 842 aa19.64■□□□□ 0.73
PTN-201ENST00000348225 DESP17661 470 aa19.64■□□□□ 0.73
PTN-201ENST00000348225 MCM3P25205 808 aa19.64■□□□□ 0.73
PTN-201ENST00000348225 TSPY1Q01534 308 aa19.64■□□□□ 0.73
PTN-201ENST00000348225 YWHAHQ04917 246 aaPredicted RBP19.64■□□□□ 0.73
PTN-201ENST00000348225 MAPRE1Q15691 268 aaKnown RBP19.64■□□□□ 0.73
PTN-201ENST00000348225 LRRC26Q2I0M4 334 aa19.64■□□□□ 0.73
PTN-201ENST00000348225 GLE1Q53GS7 698 aaKnown RBP19.64■□□□□ 0.73
PTN-201ENST00000348225 C8orf74Q6P047 294 aa19.64■□□□□ 0.73
PTN-201ENST00000348225 OLFML1Q6UWY5 402 aa19.64■□□□□ 0.73
PTN-201ENST00000348225 FAM35AQ86V20 835 aa19.64■□□□□ 0.73
PTN-201ENST00000348225 KATNAL2Q8IYT4 538 aa19.64■□□□□ 0.73
PTN-201ENST00000348225 CRIPAKQ8N1N5 446 aa19.64■□□□□ 0.73
PTN-201ENST00000348225 RTP3Q9BQQ7 232 aa19.64■□□□□ 0.73
PTN-201ENST00000348225 COLEC11Q9BWP8 271 aa19.64■□□□□ 0.73
PTN-201ENST00000348225 B3GNT5Q9BYG0 378 aa19.64■□□□□ 0.73
PTN-201ENST00000348225 EPC1Q9H2F5 836 aa19.64■□□□□ 0.73
PTN-201ENST00000348225 NRDE2Q9H7Z3 1164 aa19.64■□□□□ 0.73
PTN-201ENST00000348225 KRT82Q9NSB4 513 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms