RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 WWOXQ9NZC7 414 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 BCORL1Q5H9F3 1711 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 YWHABP31946 246 aaKnown RBP12.25□□□□□ -0.45
TRAF3-201ENST00000347662 EIF3EP60228 445 aaKnown RBP12.25□□□□□ -0.45
TRAF3-201ENST00000347662 DPF3Q92784 378 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 VCPKMTQ9H867 229 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 ING3Q9NXR8 418 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 ADAMTS1Q9UHI8 967 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 FBXL21Q9UKT6 434 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 ALBP02768 609 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 POU4F1Q01851 419 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 NR1H3Q13133 447 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 RBAKQ9NYW8 714 aaPredicted RBP12.25□□□□□ -0.45
TRAF3-201ENST00000347662 POLLQ9UGP5 575 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 DNALI1O14645 258 aaPredicted RBP12.25□□□□□ -0.45
TRAF3-201ENST00000347662 OR6A2O95222 327 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 PTPN7P35236 360 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 ATG4CQ96DT6 458 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 CAPN15O75808 1086 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 NR3C1P04150 777 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 ZNF543Q08ER8 600 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 HHIPL2Q6UWX4 724 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 C16orf89Q6UX73 402 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 ZNF564Q8TBZ8 553 aaPredicted RBP12.25□□□□□ -0.45
TRAF3-201ENST00000347662 PMM1Q92871 262 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 STK33Q9BYT3 514 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 MFSD1Q9H3U5 465 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 NPHS2Q9NP85 383 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 ADARB2Q9NS39 739 aaKnown RBP12.25□□□□□ -0.45
TRAF3-201ENST00000347662 MARCOQ9UEW3 520 aaPredicted RBP12.25□□□□□ -0.45
TRAF3-201ENST00000347662 RWDD2AQ9UIY3 292 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 RNASEH1O60930 286 aaKnown RBP12.25□□□□□ -0.45
TRAF3-201ENST00000347662 APRTP07741 180 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 TRIM49P0CI25 452 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 TRIM49CP0CI26 452 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 ARSEP51690 589 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 CAV1Q03135 178 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 VIPAS39Q9H9C1 493 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 GGT7Q9UJ14 662 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 CRLS1Q9UJA2 301 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 PPP2R3BQ9Y5P8 575 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 CEP170BQ9Y4F5 1589 aaPredicted RBP12.24□□□□□ -0.45
TRAF3-201ENST00000347662 ENTPD3O75355 529 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 OR1G1P47890 313 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 HARS2P49590 506 aaKnown RBP12.24□□□□□ -0.45
TRAF3-201ENST00000347662 LRRC63Q05C16 580 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 NCAPHQ15003 741 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 SNX17Q15036 470 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 FBXO42Q6P3S6 717 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 LRRC39Q96DD0 335 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 RPS12P25398 132 aaKnown RBP12.24□□□□□ -0.45
TRAF3-201ENST00000347662 EDRF1Q3B7T1 1238 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 HLA-DQA1Q5Y7H0 255 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 CYP4Z1Q86W10 505 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 C10orf88Q9H8K7 445 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 SLC9A8Q9Y2E8 581 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 KDM4FA0A1W2PPD8 638 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 TRIM3O75382 744 aaPredicted RBP12.24□□□□□ -0.45
TRAF3-201ENST00000347662 PEX5P50542 639 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 GALNTL6Q49A17 601 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 AASDHQ4L235 1098 aaPredicted RBP12.24□□□□□ -0.45
TRAF3-201ENST00000347662 UNC13DQ70J99 1090 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 RD3Q7Z3Z2 195 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 MB21D2Q8IYB1 491 aaPredicted RBP12.24□□□□□ -0.45
TRAF3-201ENST00000347662 CACTIN-AS1Q8N1I8 211 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 MBD2Q9UBB5 411 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 SMIM22K7EJ46 135 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 ZBTB39O15060 712 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 CLCN6P51797 869 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 CCDC144BQ3MJ40 725 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 ALKBH5Q6P6C2 394 aaKnown RBP12.24□□□□□ -0.45
TRAF3-201ENST00000347662 GLT1D1Q96MS3 346 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 TRPM5Q9NZQ8 1165 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 UMPSP11172 480 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 ALDH9A1P49189 494 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 SGSM1Q2NKQ1 1148 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 FOXR1Q6PIV2 292 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 RSPH1Q8WYR4 309 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 LIMA1Q9UHB6 759 aaKnown RBP12.24□□□□□ -0.45
TRAF3-201ENST00000347662 FBXO10Q9UK96 956 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 DIS3Q9Y2L1 958 aaKnown RBP12.24□□□□□ -0.45
TRAF3-201ENST00000347662 TAF4O00268 1085 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 CPSF4O95639 269 aaKnown RBP12.24□□□□□ -0.45
TRAF3-201ENST00000347662 TBXAS1P24557 533 aaPredicted RBP12.24□□□□□ -0.45
TRAF3-201ENST00000347662 SCRN3Q0VDG4 424 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 SFSWAPQ12872 951 aaKnown RBP12.24□□□□□ -0.45
TRAF3-201ENST00000347662 COASYQ13057 564 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 CENPLQ8N0S6 344 aaPredicted RBP12.24□□□□□ -0.45
TRAF3-201ENST00000347662 FAR2Q96K12 515 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 RGS18Q9NS28 235 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 NMRK1Q9NWW6 199 aa12.24□□□□□ -0.45
TRAF3-201ENST00000347662 NEXMIFQ5QGS0 1516 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 ACSL4O60488 711 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 S100A9P06702 114 aaKnown RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 FGFR1P11362 822 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 WEE1P30291 646 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 TRIM16LQ309B1 348 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 RABL6Q3YEC7 729 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 ZNF57Q68EA5 555 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 ZNF746Q6NUN9 644 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms