RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 HIC1Q14526 733 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 ITIH4Q14624 930 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 SMAD1Q15797 465 aaKnown RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 SLC10A6Q3KNW5 377 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 EAPPQ56P03 285 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 TFDP3Q5H9I0 405 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 ZFYVE27Q5T4F4 411 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 SWT1Q5T5J6 900 aaKnown RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 ZNF365Q70YC5 407 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 SPATS2Q86XZ4 545 aaKnown RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 RELL1Q8IUW5 271 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 WDR49Q8IV35 697 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 CCDC63Q8NA47 563 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 RFWD2Q8NHY2 731 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 NDRG1Q92597 394 aaKnown RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 HSPH1Q92598 858 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 KCNN1Q92952 543 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 SERAC1Q96JX3 654 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 FZD8Q9H461 694 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 NOD2Q9HC29 1040 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 SMYD2Q9NRG4 433 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 HOXC10Q9NYD6 342 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 SLC17A6Q9P2U8 582 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 C5orf42Q9H799 3197 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 EIF4E1BA6NMX2 242 aaKnown RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 C19orf81C9J6K1 198 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 F5H423 210 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 SGK1O00141 431 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 ALOX15BO15296 676 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 MICAL2O94851 1124 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 AMHP03971 560 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 GHRP10912 638 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 ADRA1DP25100 572 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 GPD2P43304 727 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 CTCFP49711 727 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 GNPTABQ3T906 1256 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 ZNF618Q5T7W0 954 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 EFCAB12Q6NXP0 572 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 DNAJC24Q6P3W2 148 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 GADL1Q6ZQY3 521 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 SH2D5Q6ZV89 423 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 ZC3H18Q86VM9 953 aaKnown RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 ERICH1Q86X53 443 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 UNC5BQ8IZJ1 945 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 VCPIP1Q96JH7 1222 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 CFAP57Q96MR6 1250 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 ZMAT2Q96NC0 199 aaKnown RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 NIF3L1Q9GZT8 377 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 CYLDQ9NQC7 956 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 IP6K2Q9UHH9 426 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 ZMYND8Q9ULU4 1186 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 HES2Q9Y543 173 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 A0A087WZ62 844 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 EXOC1LA0A1B0GW35 172 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 INO80B-WBP1J3KQ70 363 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 OGTO15294 1046 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 CBX6O95503 412 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 ZNF286BP0CG31 522 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 CYP2C8P10632 490 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 RPS12P25398 132 aaKnown RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 RGS7P49802 495 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 PLCB3Q01970 1234 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 TAZQ16635 292 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 ZNF699Q32M78 642 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 CELF3Q5SZQ8 465 aaKnown RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 DCUN1D2Q6PH85 259 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 TSHZ1Q6ZSZ6 1077 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 SPATA21Q7Z572 469 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 PNMA8AQ86V59 439 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 RIOX2Q8IUF8 465 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 RCOR2Q8IZ40 523 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 DNERQ8NFT8 737 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 DCAKDQ8WVC6 231 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 SEPT1Q8WYJ6 367 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 FDXACB1Q9BRP7 624 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 BCO2Q9BYV7 579 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 INO80BQ9C086 356 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 C20orf27Q9GZN8 174 aa6.35□□□□□ -1.39
CLCN3-201ENST00000347613 PIH1D1Q9NWS0 290 aaKnown RBP6.35□□□□□ -1.39
CLCN3-201ENST00000347613 TRIP12Q14669 1992 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-201ENST00000347613 GAS8O95995 478 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 KRT3P12035 628 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 CD19P15391 556 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 KRT4P19013 534 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 PSMA2P25787 234 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 TARSP26639 723 aaKnown RBP6.34□□□□□ -1.39
CLCN3-201ENST00000347613 GSCP56915 257 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-201ENST00000347613 PSMC1P62191 440 aaKnown RBP6.34□□□□□ -1.39
CLCN3-201ENST00000347613 TMEM62Q0P6H9 643 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 SLC10A2Q12908 348 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-201ENST00000347613 MTFR1Q15390 333 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 CDO1Q16878 200 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 DUOXA2Q1HG44 320 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 WLSQ5T9L3 541 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 TMCO4Q5TGY1 634 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 LIN9Q5TKA1 542 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 ATF7IP2Q5U623 682 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 METTL7BQ6UX53 244 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms