RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 CFAP221Q4G0U5 840 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 ELMOD1Q8N336 334 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 SPATA18Q8TC71 538 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 C2orf15Q8WU43 125 aaKnown RBP17.15■□□□□ 0.34
RAB5C-201ENST00000346213 SLC22A12Q96S37 553 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 SLC46A2Q9BY10 475 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 B3GNT5Q9BYG0 378 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 TRPV4Q9HBA0 871 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 ARHGEF3Q9NR81 526 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 FANCLQ9NW38 375 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 WNT16Q9UBV4 365 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 CDH9Q9ULB4 789 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 CCL26Q9Y258 94 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 ZNF197O14709 1029 aa17.14■□□□□ 0.33
RAB5C-201ENST00000346213 MAPK13O15264 365 aa17.14■□□□□ 0.33
RAB5C-201ENST00000346213 TUFMP49411 452 aaKnown RBP17.14■□□□□ 0.33
RAB5C-201ENST00000346213 TRPC3Q13507 836 aa17.14■□□□□ 0.33
RAB5C-201ENST00000346213 CBWD6Q4V339 395 aa17.14■□□□□ 0.33
RAB5C-201ENST00000346213 WDR44Q5JSH3 913 aa17.14■□□□□ 0.33
RAB5C-201ENST00000346213 CBWD3Q5JTY5 395 aa17.14■□□□□ 0.33
RAB5C-201ENST00000346213 CBWD5Q5RIA9 395 aa17.14■□□□□ 0.33
RAB5C-201ENST00000346213 MTSS1LQ765P7 747 aa17.14■□□□□ 0.33
RAB5C-201ENST00000346213 OR6B3Q8NGW1 331 aa17.14■□□□□ 0.33
RAB5C-201ENST00000346213 SMARCD2Q92925 531 aa17.14■□□□□ 0.33
RAB5C-201ENST00000346213 ELSPBP1Q96BH3 223 aa17.14■□□□□ 0.33
RAB5C-201ENST00000346213 ATXN3LQ9H3M9 355 aa17.14■□□□□ 0.33
RAB5C-201ENST00000346213 TBC1D17Q9HA65 648 aa17.14■□□□□ 0.33
RAB5C-201ENST00000346213 ABCB6Q9NP58 842 aa17.14■□□□□ 0.33
RAB5C-201ENST00000346213 IFNKQ9P0W0 207 aa17.14■□□□□ 0.33
RAB5C-201ENST00000346213 DLGAP2Q9P1A6 1054 aa17.14■□□□□ 0.33
RAB5C-201ENST00000346213 FBXL21Q9UKT6 434 aa17.14■□□□□ 0.33
RAB5C-201ENST00000346213 NFE2L3Q9Y4A8 694 aa17.14■□□□□ 0.33
RAB5C-201ENST00000346213 SLC38A8A6NNN8 435 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 CBFA2T2O43439 604 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 PHACTR2O75167 634 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 NOL4O94818 638 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 ZNF18P17022 549 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 ATICP31939 592 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 GNL1P36915 607 aaPredicted RBP17.13■□□□□ 0.33
RAB5C-201ENST00000346213 TNNC1P63316 161 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 NFE2Q16621 373 aaPredicted RBP17.13■□□□□ 0.33
RAB5C-201ENST00000346213 GPR158Q5T848 1215 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 ASTLQ6HA08 431 aaPredicted RBP17.13■□□□□ 0.33
RAB5C-201ENST00000346213 MYCBPAPQ8TBZ2 947 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 WHAMMQ8TF30 809 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 ZFYVE19Q96K21 471 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 ARID3AQ99856 593 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 GTPBP4Q9BZE4 634 aaKnown RBP17.13■□□□□ 0.33
RAB5C-201ENST00000346213 XPO4Q9C0E2 1151 aaKnown RBP17.13■□□□□ 0.33
RAB5C-201ENST00000346213 HEBP1Q9NRV9 189 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 MAGED2Q9UNF1 606 aaPredicted RBP17.13■□□□□ 0.33
RAB5C-201ENST00000346213 FRMD4BQ9Y2L6 1034 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 HCN4Q9Y3Q4 1203 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 ASB3Q9Y575 518 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 HEPACAM2A8MVW5 462 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 ZNF500O60304 480 aaPredicted RBP17.13■□□□□ 0.33
RAB5C-201ENST00000346213 ATP1A3P13637 1013 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 PTPN1P18031 435 aaKnown RBP17.13■□□□□ 0.33
RAB5C-201ENST00000346213 PCSK1P29120 753 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 PSMC2P35998 433 aaKnown RBP17.13■□□□□ 0.33
RAB5C-201ENST00000346213 SMARCB1Q12824 385 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 TXNDC8Q6A555 127 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 TTI2Q6NXR4 508 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 CCDC186Q7Z3E2 898 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 SPATA2LQ8IUW3 424 aaPredicted RBP17.13■□□□□ 0.33
RAB5C-201ENST00000346213 ARID3BQ8IVW6 561 aaPredicted RBP17.13■□□□□ 0.33
RAB5C-201ENST00000346213 SCN4BQ8IWT1 228 aa17.13■□□□□ 0.33
RAB5C-201ENST00000346213 SUGP1Q8IWZ8 645 aaKnown RBP17.13■□□□□ 0.33
RAB5C-201ENST00000346213 CCDC47Q96A33 483 aaKnown RBP17.13■□□□□ 0.33
RAB5C-201ENST00000346213 BEST1O76090 585 aa17.12■□□□□ 0.33
RAB5C-201ENST00000346213 AOC1P19801 751 aa17.12■□□□□ 0.33
RAB5C-201ENST00000346213 PIK3CAP42336 1068 aa17.12■□□□□ 0.33
RAB5C-201ENST00000346213 PGFP49763 221 aa17.12■□□□□ 0.33
RAB5C-201ENST00000346213 ZXDBP98169 803 aa17.12■□□□□ 0.33
RAB5C-201ENST00000346213 CYP27A1Q02318 531 aa17.12■□□□□ 0.33
RAB5C-201ENST00000346213 ZNF687Q8N1G0 1237 aa17.12■□□□□ 0.33
RAB5C-201ENST00000346213 LEMD2Q8NC56 503 aa17.12■□□□□ 0.33
RAB5C-201ENST00000346213 B3GALNT2Q8NCR0 500 aa17.12■□□□□ 0.33
RAB5C-201ENST00000346213 ZNF830Q96NB3 372 aaPredicted RBP17.12■□□□□ 0.33
RAB5C-201ENST00000346213 DDX23Q9BUQ8 820 aaKnown RBP17.12■□□□□ 0.33
RAB5C-201ENST00000346213 BCO2Q9BYV7 579 aa17.12■□□□□ 0.33
RAB5C-201ENST00000346213 SLITRK6Q9H5Y7 841 aa17.12■□□□□ 0.33
RAB5C-201ENST00000346213 IMPACTQ9P2X3 320 aa17.12■□□□□ 0.33
RAB5C-201ENST00000346213 KIF26AQ9ULI4 1882 aaPredicted RBP17.11■□□□□ 0.33
RAB5C-201ENST00000346213 A8MXQ7 604 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 F8VP50 259 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 DCNP07585 359 aaKnown RBP17.11■□□□□ 0.33
RAB5C-201ENST00000346213 CCDC130P13994 396 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 MAGEA11P43364 429 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 NDST1P52848 882 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 UBASH3AP57075 661 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 NHLH1Q02575 133 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 ZNF667Q5HYK9 610 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 INTS8Q75QN2 995 aaKnown RBP17.11■□□□□ 0.33
RAB5C-201ENST00000346213 ACOT1Q86TX2 421 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 C12orf29Q8N999 325 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 ZMIZ2Q8NF64 920 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 CHFRQ96EP1 664 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 FUBP3Q96I24 572 aaKnown RBP eCLIP17.11■□□□□ 0.334e-7■■■□□ 18.4
RAB5C-201ENST00000346213 MYRFLQ96LU7 910 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms