RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 A0A0A6YYK5 440 aaPredicted RBP13.94□□□□□ -0.18
CASC4-202ENST00000345795 RIPK2O43353 540 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 MSCO60682 206 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 ASS1P00966 412 aaKnown RBP13.94□□□□□ -0.18
CASC4-202ENST00000345795 MT-ND3P03897 115 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 ROR1Q01973 937 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 OGDHQ02218 1023 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 CHMP6Q96FZ7 201 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 FAM81BQ96LP2 452 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 TRAIPQ9BWF2 469 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 ASNSD1Q9NWL6 643 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 COMMD10Q9Y6G5 202 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 CDK5RAP2Q96SN8 1893 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 SPDYE5A6NIY4 337 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 ERBB2P04626 1255 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 TGFB3P10600 412 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 ELNP15502 786 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 SMPD1P17405 629 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 ARL2P36404 184 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 ATN1P54259 1190 aaPredicted RBP13.94□□□□□ -0.18
CASC4-202ENST00000345795 SEPT6Q14141 434 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 TAF12Q16514 161 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 KCNV2Q8TDN2 545 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 PPM1EQ8WY54 764 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 XPO6Q96QU8 1125 aaKnown RBP13.94□□□□□ -0.18
CASC4-202ENST00000345795 TINF2Q9BSI4 451 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 EPN3Q9H201 632 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 ATXN3LQ9H3M9 355 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 KLHL8Q9P2G9 620 aaPredicted RBP13.94□□□□□ -0.18
CASC4-202ENST00000345795 LMO2P25791 158 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 HSPA9P38646 679 aaKnown RBP13.94□□□□□ -0.18
CASC4-202ENST00000345795 MLH1P40692 756 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 CPA2P48052 419 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 DENND5BQ6ZUT9 1274 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 PID1Q7Z2X4 250 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 BRI3BPQ8WY22 251 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 CAVIN3Q969G5 261 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 ELOVL4Q9GZR5 314 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 MROH8Q9H579 483 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 MAP3K20Q9NYL2 800 aaKnown RBP13.94□□□□□ -0.18
CASC4-202ENST00000345795 KLHL14Q9P2G3 628 aa13.94□□□□□ -0.18
CASC4-202ENST00000345795 COL4A5P29400 1685 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 LAMB2P55268 1798 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 CXCL11O14625 94 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 RPS6KA5O75582 802 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 LYPLA2O95372 231 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 KRT4P19013 534 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 SULT1E1P49888 294 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 FBXO36Q8NEA4 188 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 APPL2Q8NEU8 664 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 USP6NLQ92738 828 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 ECM29Q5VYK3 1845 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 MEIS3P2A8K0S8 358 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 HMGCRP04035 888 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 NCAM1P13591 858 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 AMPD1P23109 780 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 GDF10P55107 478 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 ADIGQ0VDE8 80 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 SETDB1Q15047 1291 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 TFDP3Q5H9I0 405 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 SEC16BQ96JE7 1060 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 TRABDQ9H4I3 376 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.93□□□□□ -0.18
CASC4-202ENST00000345795 KIAA1551Q9HCM1 1747 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 DUPD1Q68J44 220 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 NPHS2Q9NP85 383 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 SLCO1B3Q9NPD5 702 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 NAALADL1Q9UQQ1 740 aa13.93□□□□□ -0.18
CASC4-202ENST00000345795 M0QYT0 321 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 DFFAO00273 331 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 SLC26A4O43511 780 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 KRT7P08729 469 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 HOXA7P31268 230 aaPredicted RBP13.92□□□□□ -0.18
CASC4-202ENST00000345795 PKN2Q16513 984 aaKnown RBP13.92□□□□□ -0.18
CASC4-202ENST00000345795 SLC10A6Q3KNW5 377 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 CCDC91Q7Z6B0 441 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 TADA2BQ86TJ2 420 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 UNC45BQ8IWX7 931 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 PYROXD2Q8N2H3 581 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 PARK7Q99497 189 aaKnown RBP13.92□□□□□ -0.18
CASC4-202ENST00000345795 MYO18AQ92614 2054 aaKnown RBP13.92□□□□□ -0.18
CASC4-202ENST00000345795 SPTLC1O15269 473 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 GPD1P21695 349 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 GJA5P36382 358 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 SURF1Q15526 300 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 B3GNT9Q6UX72 402 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 FAM183BPQ6ZVS7 135 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 MCUQ8NE86 351 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 EXT2Q93063 718 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 KLHL29Q96CT2 875 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 RHOBTB2Q9BYZ6 727 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 STRIP2Q9ULQ0 834 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 CYP1A2P05177 515 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 TPH1P17752 444 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 ATP5DP30049 168 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 ARL4CP56559 192 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 TRIM68Q6AZZ1 485 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 TRIM72Q6ZMU5 477 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 RNF135Q8IUD6 432 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 RCOR2Q8IZ40 523 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms