RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 ACOT2P49753 483 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 NCKAP1LP55160 1127 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 TPI1P60174 286 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 RRP1BQ14684 758 aaKnown RBP18.75■□□□□ 0.59
SMC4-201ENST00000344722 PDIA6Q15084 440 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 PKN2Q16513 984 aaKnown RBP18.75■□□□□ 0.59
SMC4-201ENST00000344722 WDR72Q3MJ13 1102 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 TRIM69Q86WT6 500 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 IQCKQ8N0W5 287 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 ZNF513Q8N8E2 541 aaPredicted RBP18.75■□□□□ 0.59
SMC4-201ENST00000344722 ZNF280CQ8ND82 737 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 OR6Y1Q8NGX8 325 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 EGFL8Q99944 293 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 PTPRMP28827 1452 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 UBA6A0AVT1 1052 aaPredicted RBP18.75■□□□□ 0.59
SMC4-201ENST00000344722 ADGRB2O60241 1585 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 RASSF9O75901 435 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 ADORA2BP29275 332 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 ACCSLQ4AC99 568 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 ASAP3Q8TDY4 903 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 KAZALD1Q96I82 304 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 THAP1Q9NVV9 213 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 SLC39A10Q9ULF5 831 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 GTF2H1P32780 548 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 SPOCD1Q6ZMY3 1216 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 CALML6Q8TD86 181 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 MAGED4Q96JG8 741 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 NDEL1Q9GZM8 345 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 CFAP99D6REC4 459 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 EXTL3O43909 919 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 MYO1DO94832 1006 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 RARAP10276 462 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 BMP6P22004 513 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 GIT2Q14161 759 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 SEC23AQ15436 765 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 EPAS1Q99814 870 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 MRPS26Q9BYN8 205 aaKnown RBP18.75■□□□□ 0.59
SMC4-201ENST00000344722 JMJD4Q9H9V9 463 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 RAVER2Q9HCJ3 691 aaKnown RBP18.75■□□□□ 0.59
SMC4-201ENST00000344722 LRRC4BQ9NT99 713 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 E9PBE3 544 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 KLHL41O60662 606 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 GCLCP48506 637 aaPredicted RBP18.74■□□□□ 0.59
SMC4-201ENST00000344722 TRIM63Q969Q1 353 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 RBBP8Q99708 897 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 GRIP2Q9C0E4 1043 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 NRDE2Q9H7Z3 1164 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 ASNA1O43681 348 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 SULT1E1P49888 294 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 ZNF669Q96BR6 464 aaPredicted RBP18.74■□□□□ 0.59
SMC4-201ENST00000344722 PPP1R2P1Q96PQ5 205 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 RUSC1Q9BVN2 902 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 A0A087WXM4 84 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 TBC1D12O60347 775 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 RPL5P46777 297 aaKnown RBP18.74■□□□□ 0.59
SMC4-201ENST00000344722 TCHHL1Q5QJ38 904 aaPredicted RBP18.74■□□□□ 0.59
SMC4-201ENST00000344722 SLC20A1Q8WUM9 679 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 C17orf80Q9BSJ5 609 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 CCDC28BQ9BUN5 200 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.74■□□□□ 0.59
SMC4-201ENST00000344722 ZC3H13Q5T200 1668 aaKnown RBP18.74■□□□□ 0.59
SMC4-201ENST00000344722 C1orf232A0A0U1RR37 186 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 AKAP3O75969 853 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 PYGMP11217 842 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 CCNHP51946 323 aaPredicted RBP18.74■□□□□ 0.59
SMC4-201ENST00000344722 DCUN1D5Q9BTE7 237 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 SARS2Q9NP81 518 aaKnown RBP18.74■□□□□ 0.59
SMC4-201ENST00000344722 RIC8BQ9NVN3 520 aa18.74■□□□□ 0.59
SMC4-201ENST00000344722 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.73■□□□□ 0.59
SMC4-201ENST00000344722 MEI4A8MW99 385 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 ZC3H11AO75152 810 aaKnown RBP eCLIP18.73■□□□□ 0.595e-7■■■■■ 90.5
SMC4-201ENST00000344722 KCTD21Q4G0X4 260 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 CCDC80Q76M96 950 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 SORCS3Q9UPU3 1222 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 ENTPD5O75356 428 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 DRG2P55039 364 aaKnown RBP18.73■□□□□ 0.59
SMC4-201ENST00000344722 QPCTQ16769 361 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 SEPT8Q92599 483 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 ZNF556Q9HAH1 456 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 TNS3Q68CZ2 1445 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 LCP1P13796 627 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 NFKBIAP25963 317 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 SOX6P35712 828 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 MMP13P45452 471 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 HSD17B4P51659 736 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 BOLA3Q53S33 107 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 PI4K2AQ9BTU6 479 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 ARMCX1Q9P291 453 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 TLR2O60603 784 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 GSNP06396 782 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 YY1P25490 414 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 TDRD5Q8NAT2 981 aaKnown RBP18.73■□□□□ 0.59
SMC4-201ENST00000344722 ACSF2Q96CM8 615 aaPredicted RBP18.73■□□□□ 0.59
SMC4-201ENST00000344722 TMEM121Q9BTD3 319 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 BBS2Q9BXC9 721 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 PLEKHA5Q9HAU0 1116 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 RABGEF1Q9UJ41 708 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 RCCD1A6NED2 376 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 DDX3XO00571 662 aaKnown RBP eCLIP18.73■□□□□ 0.594e-78■■■■■ 527.9
SMC4-201ENST00000344722 CPA3P15088 417 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms