RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 R3HDM2Q9Y2K5 976 aaKnown RBP14.31□□□□□ -0.12
CDC42-202ENST00000344548 PTPN22Q9Y2R2 807 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 C9IYK1 514 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 FSCN2O14926 492 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 PAPSS1O43252 624 aaPredicted RBP14.31□□□□□ -0.12
CDC42-202ENST00000344548 NBNO60934 754 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 RPLP2P05387 115 aaKnown RBP14.31□□□□□ -0.12
CDC42-202ENST00000344548 RALAP11233 206 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 KRT10P13645 584 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 PSMA2P25787 234 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 MAN1A1P33908 653 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 GSCP56915 257 aaPredicted RBP14.31□□□□□ -0.12
CDC42-202ENST00000344548 SMTNL2Q2TAL5 461 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 KCNT1Q5JUK3 1230 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 OR6B2Q6IFH4 312 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 FUKQ8N0W3 1084 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 TOP6BLQ8N6T0 577 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 RAPGEF5Q92565 580 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 NDRG1Q92597 394 aaKnown RBP14.31□□□□□ -0.12
CDC42-202ENST00000344548 MIS12Q9H081 205 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 CHST7Q9NS84 486 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 TMEM30AQ9NV96 361 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 SLC38A7Q9NVC3 462 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 WARSP23381 471 aaKnown RBP14.3□□□□□ -0.12
CDC42-202ENST00000344548 PRMT2P55345 433 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 CASP8Q14790 479 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 C15orf59Q2T9L4 293 aaPredicted RBP14.3□□□□□ -0.12
CDC42-202ENST00000344548 CCDC70Q6NSX1 233 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 OLFML1Q6UWY5 402 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 ZNF280BQ86YH2 543 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 NIPA2Q8N8Q9 360 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 B3GALNT2Q8NCR0 500 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 ADAM33Q9BZ11 813 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 CRTAC1Q9NQ79 661 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 RGS18Q9NS28 235 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 TDRD15B5MCY1 1934 aaKnown RBP14.3□□□□□ -0.12
CDC42-202ENST00000344548 KBTBD13C9JR72 458 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 PSTPIP1O43586 416 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 ERLIN1O75477 346 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 B3GAT3O94766 335 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 DDHD2O94830 711 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 TFE3P19532 575 aaPredicted RBP14.3□□□□□ -0.12
CDC42-202ENST00000344548 PTGIRP43119 386 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 ATN1P54259 1190 aaPredicted RBP14.3□□□□□ -0.12
CDC42-202ENST00000344548 SLC25A11Q02978 314 aaKnown RBP14.3□□□□□ -0.12
CDC42-202ENST00000344548 CLLU1OSQ5K130 101 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 MFSD7Q6UXD7 560 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 TMEM110Q86TL2 294 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 CCDC50Q8IVM0 306 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 KATNAL2Q8IYT4 538 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 HACE1Q8IYU2 909 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 ANKRD52Q8NB46 1076 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 MAGOHBQ96A72 148 aaKnown RBP14.3□□□□□ -0.12
CDC42-202ENST00000344548 RTP3Q9BQQ7 232 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 TRIM31Q9BZY9 425 aa14.3□□□□□ -0.12
CDC42-202ENST00000344548 DDX43Q9NXZ2 648 aaKnown RBP14.3□□□□□ -0.12
CDC42-202ENST00000344548 LAMA2P24043 3122 aaKnown RBP14.3□□□□□ -0.12
CDC42-202ENST00000344548 MYBPHLA2RUH7 354 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 DAPK3O43293 454 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 PHF2O75151 1096 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 TUBBP07437 444 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 RAB27AP51159 221 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 CACNA2D1P54289 1103 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 KLF1Q13351 362 aaPredicted RBP14.29□□□□□ -0.12
CDC42-202ENST00000344548 SNX1Q13596 522 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 PIGHQ14442 188 aaPredicted RBP14.29□□□□□ -0.12
CDC42-202ENST00000344548 LRRC8DQ7L1W4 858 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 RXFP2Q8WXD0 754 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 PEBP4Q96S96 227 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 RNF208Q9H0X6 261 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 SLITRK6Q9H5Y7 841 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 PCSK1NQ9UHG2 260 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 SQORQ9Y6N5 450 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 C2CD4BA6NLJ0 364 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 DNM1LO00429 736 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 CD48P09326 243 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 PTPN1P18031 435 aaKnown RBP14.29□□□□□ -0.12
CDC42-202ENST00000344548 AARSP49588 968 aaKnown RBP eCLIP14.29□□□□□ -0.12
CDC42-202ENST00000344548 MNX1P50219 401 aaPredicted RBP14.29□□□□□ -0.12
CDC42-202ENST00000344548 TAP1Q03518 808 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 ARHGEF6Q15052 776 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 STILQ15468 1287 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 CYP1B1Q16678 543 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 CYP4V2Q6ZWL3 525 aaPredicted RBP14.29□□□□□ -0.12
CDC42-202ENST00000344548 DBF4BQ8NFT6 615 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 CFAP57Q96MR6 1250 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 NAP1L3Q99457 506 aaPredicted RBP14.29□□□□□ -0.12
CDC42-202ENST00000344548 RHOBTB2Q9BYZ6 727 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 DPH5Q9H2P9 285 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 ZWILCHQ9H900 591 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 WDR35Q9P2L0 1181 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 HESX1Q9UBX0 185 aa14.29□□□□□ -0.12
CDC42-202ENST00000344548 PQBP1O60828 265 aaKnown RBP14.28□□□□□ -0.12
CDC42-202ENST00000344548 CAND2O75155 1236 aa14.28□□□□□ -0.12
CDC42-202ENST00000344548 CCL5P13501 91 aa14.28□□□□□ -0.12
CDC42-202ENST00000344548 LCP1P13796 627 aa14.28□□□□□ -0.12
CDC42-202ENST00000344548 CBX1P83916 185 aa14.28□□□□□ -0.12
CDC42-202ENST00000344548 DR1Q01658 176 aa14.28□□□□□ -0.12
CDC42-202ENST00000344548 MDH1BQ5I0G3 518 aa14.28□□□□□ -0.12
CDC42-202ENST00000344548 KAZNQ674X7 775 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms