RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 PRUNE1Q86TP1 453 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 NDUFAF2Q8N183 169 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 EXT2Q93063 718 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 DNAJC18Q9H819 358 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 ACP6Q9NPH0 428 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 CHST7Q9NS84 486 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 LRRC4BQ9NT99 713 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 GTSE1Q9NYZ3 720 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 DTNAQ9Y4J8 743 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 PAMP19021 973 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 TAC1P20366 129 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 NAMPTP43490 491 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 EFHC2Q5JST6 749 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 TTC39BQ5VTQ0 682 aaPredicted RBP11.35□□□□□ -0.59
RPL28-201ENST00000344063 DUPD1Q68J44 220 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 NOP9Q86U38 636 aaKnown RBP11.35□□□□□ -0.59
RPL28-201ENST00000344063 ABRAQ8N0Z2 381 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 POU5F2Q8N7G0 328 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 EPS8L1Q8TE68 723 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 KIF12Q96FN5 646 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 CGRRF1Q99675 332 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 SHOC2Q9UQ13 582 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 ARHGEF37A1IGU5 675 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 A8MXQ7 604 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 LSM8O95777 96 aaKnown RBP11.35□□□□□ -0.59
RPL28-201ENST00000344063 ADRA1DP25100 572 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 TPP2P29144 1249 aaPredicted RBP11.35□□□□□ -0.59
RPL28-201ENST00000344063 SESN2P58004 480 aaPredicted RBP11.35□□□□□ -0.59
RPL28-201ENST00000344063 RRP1BQ14684 758 aaKnown RBP11.35□□□□□ -0.59
RPL28-201ENST00000344063 NBPF20Q3BBV1 942 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 KCTD21Q4G0X4 260 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 ITPRIPL1Q6GPH6 555 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 ETNPPLQ8TBG4 499 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 RBM46Q8TBY0 533 aaKnown RBP11.35□□□□□ -0.59
RPL28-201ENST00000344063 SYTL5Q8TDW5 730 aaPredicted RBP11.35□□□□□ -0.59
RPL28-201ENST00000344063 SDCCAG3Q96C92 435 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 OGTO15294 1046 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 HSPA8P11142 646 aaKnown RBP11.34□□□□□ -0.59
RPL28-201ENST00000344063 TMED10P49755 219 aaKnown RBP11.34□□□□□ -0.59
RPL28-201ENST00000344063 AQP5P55064 265 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 LRRC6Q86X45 466 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 HOMEZQ8IX15 550 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 PDCD2LQ9BRP1 358 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 AURKCQ9UQB9 309 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 TSC22D4Q9Y3Q8 395 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 SPDYE2BA6NHP3 402 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 PIK3CDO00329 1044 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 NFIBO00712 420 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 GAS2O43903 313 aaKnown RBP11.34□□□□□ -0.59
RPL28-201ENST00000344063 MGRN1O60291 552 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 PSMD10O75832 226 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 SPDYE6P0CI01 402 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 SNHG28P0DPA3 235 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 GPD1P21695 349 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 PTK6Q13882 451 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 MTFR1Q15390 333 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 BOLA3Q53S33 107 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 SPOCD1Q6ZMY3 1216 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 FAM71DQ8N9W8 422 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 AGBL3Q8NEM8 1001 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 SIKE1Q9BRV8 207 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 BTBD10Q9BSF8 475 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 CCDC90BQ9GZT6 254 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 PCDH9Q9HC56 1237 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 CLIC5Q9NZA1 410 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 ATXN2Q99700 1313 aaKnown RBP11.34□□□□□ -0.59
RPL28-201ENST00000344063 CCDC78A2IDD5 438 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 FCHO1O14526 889 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 CLPTM1O96005 669 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 AP1B1Q10567 949 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 ECM1Q16610 540 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 RYBPQ8N488 228 aaPredicted RBP11.34□□□□□ -0.59
RPL28-201ENST00000344063 FITM2Q8N6M3 262 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 TMEM165Q9HC07 324 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 ATP8B3O60423 1300 aa11.34□□□□□ -0.59
RPL28-201ENST00000344063 GNGT2O14610 69 aa11.33□□□□□ -0.59
RPL28-201ENST00000344063 KDM1AO60341 852 aa11.33□□□□□ -0.59
RPL28-201ENST00000344063 NOL4O94818 638 aa11.33□□□□□ -0.59
RPL28-201ENST00000344063 KLHL2O95198 593 aa11.33□□□□□ -0.59
RPL28-201ENST00000344063 PGM3O95394 542 aa11.33□□□□□ -0.59
RPL28-201ENST00000344063 PPP3CAQ08209 521 aa11.33□□□□□ -0.59
RPL28-201ENST00000344063 ATF7IP2Q5U623 682 aa11.33□□□□□ -0.59
RPL28-201ENST00000344063 PID1Q7Z2X4 250 aa11.33□□□□□ -0.59
RPL28-201ENST00000344063 CERKQ8TCT0 537 aa11.33□□□□□ -0.59
RPL28-201ENST00000344063 TCP10LQ8TDR4 215 aa11.33□□□□□ -0.59
RPL28-201ENST00000344063 RMDN2Q96LZ7 410 aa11.33□□□□□ -0.59
RPL28-201ENST00000344063 ZNF184Q99676 751 aaPredicted RBP11.33□□□□□ -0.59
RPL28-201ENST00000344063 ING2Q9H160 280 aa11.33□□□□□ -0.59
RPL28-201ENST00000344063 ASCC2Q9H1I8 757 aaPredicted RBP11.33□□□□□ -0.59
RPL28-201ENST00000344063 ERVK-5Q9HDB9 667 aa11.33□□□□□ -0.59
RPL28-201ENST00000344063 SPATA31C1P0DKV0 1188 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 MMP13P45452 471 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 LACTB2Q53H82 288 aaPredicted RBP11.33□□□□□ -0.6
RPL28-201ENST00000344063 ARSHQ5FYA8 562 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 HABP4Q5JVS0 413 aaKnown RBP11.33□□□□□ -0.6
RPL28-201ENST00000344063 CYP4A22Q5TCH4 519 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 MTHFD1LQ6UB35 978 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 RASGEF1CQ8N431 466 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 PRELID2Q8N945 189 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 ANKRD27Q96NW4 1050 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms