RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 DUSP15Q9H1R2 295 aaPredicted RBP7.8□□□□□ -1.16
ZNF540-202ENST00000343599 EPN3Q9H201 632 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 ZWILCHQ9H900 591 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 IL37Q9NZH6 218 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 ZFATQ9P243 1243 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 ADAMTS20P59510 1910 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 F8VZ95 297 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 ABLIM1O14639 778 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 SLC27A2O14975 620 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 ZBTB43O43298 467 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 CBFA2T3O75081 653 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 LUC7L3O95232 432 aaKnown RBP7.8□□□□□ -1.16
ZNF540-202ENST00000343599 EDN1P05305 212 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 CNPP09543 421 aaKnown RBP7.8□□□□□ -1.16
ZNF540-202ENST00000343599 ATF2P15336 505 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 DYNC1I2Q13409 638 aaKnown RBP7.8□□□□□ -1.16
ZNF540-202ENST00000343599 WHAMMP3Q1A5X7 153 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 TMEM86AQ8N2M4 240 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 ELMOD1Q8N336 334 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 ASB16Q96NS5 453 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 UNC45AQ9H3U1 944 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 SH2B1Q9NRF2 756 aaPredicted RBP7.8□□□□□ -1.16
ZNF540-202ENST00000343599 SPATA7Q9P0W8 599 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 WDR35Q9P2L0 1181 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 MYO1AQ9UBC5 1043 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 BUB1BO60566 1050 aaPredicted RBP7.79□□□□□ -1.16
ZNF540-202ENST00000343599 E2F6O75461 281 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 PRDM1O75626 825 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 DNAJC8O75937 253 aaPredicted RBP7.79□□□□□ -1.16
ZNF540-202ENST00000343599 PENKP01210 267 aaPredicted RBP7.79□□□□□ -1.16
ZNF540-202ENST00000343599 CCINQ13939 588 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 SURF1Q15526 300 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 CRTC2Q53ET0 693 aaPredicted RBP7.79□□□□□ -1.16
ZNF540-202ENST00000343599 NUGGCQ68CJ6 796 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 TEX9Q8N6V9 391 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 SLC7A3Q8WY07 619 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 RIN2Q8WYP3 895 aaPredicted RBP7.79□□□□□ -1.16
ZNF540-202ENST00000343599 STAMBPL1Q96FJ0 436 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 ZSCAN31Q96LW9 406 aaPredicted RBP7.79□□□□□ -1.16
ZNF540-202ENST00000343599 SEC62Q99442 399 aaKnown RBP7.79□□□□□ -1.16
ZNF540-202ENST00000343599 NOD2Q9HC29 1040 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 TOPORSQ9NS56 1045 aaPredicted RBP7.79□□□□□ -1.16
ZNF540-202ENST00000343599 THG1LQ9NWX6 298 aaKnown RBP7.79□□□□□ -1.16
ZNF540-202ENST00000343599 MAPK8IP1Q9UQF2 711 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 WDR37Q9Y2I8 494 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 GMEB1Q9Y692 573 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 A0A1B0GVG6 124 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 TARSL2A2RTX5 802 aaKnown RBP7.79□□□□□ -1.16
ZNF540-202ENST00000343599 TOR1BO14657 336 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 MSH4O15457 936 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 RHOXF2BP0C7M4 288 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 MYO1EQ12965 1108 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 PDAP1Q13442 181 aaKnown RBP7.79□□□□□ -1.16
ZNF540-202ENST00000343599 C4orf46Q504U0 113 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 RNF187Q5TA31 235 aaPredicted RBP7.79□□□□□ -1.16
ZNF540-202ENST00000343599 CAPN12Q6ZSI9 719 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 TMC7Q7Z402 723 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 ZBTB8OSQ8IWT0 167 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 CADM4Q8NFZ8 388 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 ZNF473Q8WTR7 871 aaKnown RBP7.79□□□□□ -1.16
ZNF540-202ENST00000343599 CNOT6LQ96LI5 555 aaKnown RBP7.79□□□□□ -1.16
ZNF540-202ENST00000343599 MTMR9Q96QG7 549 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 RHOXF2Q9BQY4 288 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 HAUS2Q9NVX0 235 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 SUSD2Q9UGT4 822 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 CEP192Q8TEP8 1941 aa7.79□□□□□ -1.16
ZNF540-202ENST00000343599 KMT2BQ9UMN6 2715 aaPredicted RBP7.78□□□□□ -1.16
ZNF540-202ENST00000343599 VPS37CA5D8V6 355 aaPredicted RBP7.78□□□□□ -1.16
ZNF540-202ENST00000343599 SMCO2A6NFE2 343 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 SLC9A3R1O14745 358 aaPredicted RBP7.78□□□□□ -1.16
ZNF540-202ENST00000343599 STX10O60499 249 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 DSG2Q14126 1118 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 MEA1Q16626 185 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 KLHDC10Q6PID8 442 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 FAM114A1Q8IWE2 563 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 PHC3Q8NDX5 983 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 SPPL2BQ8TCT7 592 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 TMEM40Q8WWA1 233 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 ATRIPQ8WXE1 791 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 RMDN2Q96LZ7 410 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 FAM193BQ96PV7 902 aaPredicted RBP7.78□□□□□ -1.16
ZNF540-202ENST00000343599 ALG2Q9H553 416 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 ASB7Q9H672 318 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 ZSWIM6Q9HCJ5 1215 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 ZNF334Q9HCZ1 680 aaPredicted RBP7.78□□□□□ -1.16
ZNF540-202ENST00000343599 SUCLA2Q9P2R7 463 aaPredicted RBP7.78□□□□□ -1.16
ZNF540-202ENST00000343599 DNMT3BQ9UBC3 853 aaKnown RBP7.78□□□□□ -1.16
ZNF540-202ENST00000343599 C2CD2Q9Y426 696 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 HTTP42858 3142 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 A0A087WV48 116 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 CTAGE15A4D2H0 777 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 H3BQ06 376 aaPredicted RBP7.78□□□□□ -1.16
ZNF540-202ENST00000343599 EDIL3O43854 480 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 SMIM24O75264 130 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 ANP32DO95626 131 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 CTAGE8P0CG41 777 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 PSMC3P17980 439 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 CYP11B2P19099 503 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 TUFMP49411 452 aaKnown RBP7.78□□□□□ -1.16
ZNF540-202ENST00000343599 GPR17Q13304 367 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms